Sinorhizobium fredii HH103: SFHH103_03510
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Entry
SFHH103_03510 CDS
T01731
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sfh
Sinorhizobium fredii HH103
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfh03032
]
SFHH103_03510 (gyrB)
03400 DNA repair and recombination proteins [BR:
sfh03400
]
SFHH103_03510 (gyrB)
Enzymes [BR:
sfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SFHH103_03510 (gyrB)
DNA replication proteins [BR:
sfh03032
]
Prokaryotic type
DNA Topoisomerases
SFHH103_03510 (gyrB)
DNA repair and recombination proteins [BR:
sfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SFHH103_03510 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CCE98001
UniProt:
G9A467
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All DBs
Position
3812401..3814836
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AA seq
811 aa
AA seq
DB search
MTDISETEAGATAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNPDGSCTVTDNGRGIPTDIHREEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVSLKLKIRRAGKIHEMSFTHGVADGSLAITGDAGSETGTEVTF
LPSEQTFSKTEFDFATLEHRLRELAFLNSGVRIVLTDKRHSDIRRDEMMYDGGLEAFVAY
LDRAKKPLVHKPVSIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRGA
LTRQITSYADTSGITKKEKVSLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSVWLEEHPSEAKILVGKVVEAAAAREAARKARELTRRKGALDISSLPGKLA
DCSERDPAKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTSIGKDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVTRGKSAQYLKDEKALEDYLITMGLEEASLTLGSGEVRAGQDLREVINDALR
LRSLMEGLHSRYNRAIVEQAAIAGALNTELNSHQDDYQQVAAEVARRLDVIAEETERGWA
GSVTAEGGLRLERMVRGVKEAAVLDMALIGSSDARHIDQLSGKLKEIYSEPPVLRRRDGT
LEISGPRALLDAIFAAGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVRVADATDA
DGLFSRLMGDEVEPRRDFIQENALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatctctgagaccgaagccggcgcgaccgccgaatatggtgccgattccatc
aaggtgctgaagggcctggacgccgtccgcaagcggccgggcatgtatatcggcgatacc
gacgatggctccggtctgcaccacatggtctatgaggtcgtcgacaacgcgatcgacgag
gcgctggccggccacgccgacatcgtcaccgtcacgctcaatcccgatggttcctgcacc
gtgacggataacggccgcggcattccgacggatatccaccgggaagagggcgtctcggcg
gccgaggtcatcatgacccagctccatgccggcggcaaattcgaccaaaactcctacaag
gtctccggcggtctgcacggcgtcggcgtctcggtcgtcaatgcgctctccgtctcgcta
aagctcaagatccgccgcgccggcaagatccacgaaatgagcttcacccacggcgtcgcc
gacgggtcgctggcgatcaccggcgacgccggcagcgagaccggcaccgaagtcaccttc
ctgccgagcgagcagaccttctcgaagaccgaattcgactttgcgacgctcgaacaccgc
ctgcgcgagcttgccttcctgaattccggtgtccgtatcgtcttgaccgacaagcgccac
tcggacattcgccgcgacgagatgatgtatgacggcggcctcgaggccttcgtcgcctat
ctcgatcgggcgaagaaaccgctcgtccacaagccggtgtcgatccgtggcgagaaggac
gggatcaccgtcgaggtggcgatgtggtggaacgacagctaccacgagaatgtgctctgc
ttcaccaacaacattccgcagcgcgacggcggcacgcatatggccggcttccgcggcgcg
ctcacccgacagatcacttcctatgccgatacctctggcatcaccaagaaggaaaaggtg
tcgctgaccggcgacgattgccgcgaggggcttacggcggttctgtcggtcaaggtgccg
gatccgaagttctcgtcgcagaccaaggataagctggtatcctccgaggttcgcccagtg
gtcgagagcctcgtcaacgaggcgctcagcgtctggctcgaggaacatccgtccgaggcg
aagatcctcgtcggcaaggtcgtcgaggcggctgcggcacgcgaggcggcccgcaaggcc
cgcgaactgacgcgccgcaagggcgcgctcgacatctcgtcgctgccgggcaagctcgcc
gactgctcggagcgcgatccggccaagtcggaagtgttcctggtggagggcgactcggct
ggcggttcggccaagcagggccggtcgcgcgagaaccaggcgatcctgccgctgcgcggc
aagatcctcaacgtcgaacgcgcccggttcgacaagatgctgtcgagccaggaaatcggc
acgctgatcaccgcgctcggcacctcgatcggcaaggacgagttcaatgccgacaagctg
cgctaccacaagatcatcatcatgacggacgccgacgtcgacggcgcccacatccgcaca
ctgctgctcaccttcttcttccggcagatgccggagctgatcgagcgcggccacctctat
atcgcccagccgccgctctacaaggtgacgcgcggcaagtccgcccagtacctgaaggac
gaaaaggcgctcgaggactatctgatcaccatgggcctcgaggaggcatccttgacgctc
ggctccggcgaggtcagggccgggcaggatctccgcgaggtgatcaacgacgccctgcgg
ctgcggtcgctgatggaggggctgcattcgcgctacaaccgggcgatcgtcgagcaggcg
gcaattgccggcgcgctcaataccgagctcaacagccaccaggacgactaccagcaggtc
gccgccgaagtggcgcgacggcttgacgtcattgccgaggaaaccgaacgcggctgggcc
ggatcggtgaccgccgagggcggcctgaggctcgagcgcatggtccgcggcgtcaaggaa
gcggccgtgctcgacatggcgctgataggctcgtccgatgcccgccacatcgaccagctc
agcggcaagctcaaggaaatctactcggagccgcctgttctgcgccgccgcgacggcacg
ctggagatcagcgggccgcgcgccctgctggacgcgatcttcgccgccggccgcaagggc
ctgacgatgcagcgctacaagggcctcggcgagatgaacgccgagcaattgtgggaaacg
acgctcgacccgaacgtccgctcgctcttgcaggtcagggtcgccgacgccacagatgcg
gacggcctgttctcgcgcctgatgggcgacgaggtcgagccgcgccgcgacttcatccag
gaaaacgctttgagcgtcgccaacctcgatatctga
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