Sinorhizobium fredii HH103: SFHH103_03532
Help
Entry
SFHH103_03532 CDS
T01731
Name
(GenBank) DNA helicase (double-strand break repair), AddA type
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sfh
Sinorhizobium fredii HH103
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfh03400
]
SFHH103_03532
Enzymes [BR:
sfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFHH103_03532
DNA repair and recombination proteins [BR:
sfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SFHH103_03532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
NPHP3_N
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCE98023
UniProt:
G9A489
LinkDB
All DBs
Position
complement(3837414..3840983)
Genome browser
AA seq
1189 aa
AA seq
DB search
MRNDAFGPEERTPKAWLDWTTERQSLASDPARSAWVSANAGSGKTHVLTQRVIRLLLAGC
RPSAILCLTYTKAAASEMSNRIFERLAEWATLDDATLEKRIEAVECKRPPLAKIQEARRL
FAKALETPGGLKIQTIHAFSEALLHQFPLEANVAGHFSVLDDRAAAVLLADARRALLSAT
AAEGETELAEAFATVLDLADDTGLEKLLQAIVANRASIQAFLDHASGQGGREPQLRAALG
LAAGESADSVMAGAWPLAGLNGAALEHYIGLALSHGGVKPCEIAEGLKAVRDTPGAEERF
AKLSSVFFNGGGKPKAESAFFNKVMLAQAPQLTPLIDEARRHIVSTADRLSIVRMYEATR
AALILAERLNRDYEELKKRRSQLDFEDLINRTAALLSRSDVGAWVHYKLDQGIDHILVDE
AQDTSPAQWTIIQALAADFFAGETARGDDRTIFAVGDEKQSIYSFQGARPERFSRESVLT
ERRVRAGNRYFSPIRLQLSFRSTVDVLSAVDTVFANPGNAKGLSARNEAVVHASNRIGHP
GAVDMWDVIAPEPTTSEEEWTAPFDATPERAPVNILARRIAAVLETWIGRETVIDKGVRR
PMRPGDVIVLVRKRDAFVNALTRALKRRGNIPVAGADRLVLTNHIAVQDLLALGRFVLLP
EDDLSLAALLKSPLVNLGEDDVFELAARRAAGESLWQRLQQLGAEEASRYHRVVRILAGY
GELARDLLPHDFYARVLGANGGRRAFLARLGSEVSDILDEFLTFALDQERSGLPGLQAFI
STLEIEAPTVKREQDKERDEVRVMTVHAAKGLEAPVVLLVDGGGEAFVRQQVSDLRFLEK
QQADGSIVSVPVWRAPGSASNSLISEDNERLKRLAEEEYRRLLYVGMTRAADRLIVCGYR
GQRQNLDTWHAMVQGTLSHDPKGRATPMVFRAGGEEWTGHAWREAPVPVTIPGSGEAGSK
PEAMASDLPRALFAPLPAQRRLPRPLAPSGTSVAIDDPDQEAIVGSALFAAQATPKFSML
RGAILHRLLQVLPTIDGAVRRDAAKRYLARAVPSWPDAERRTLTGAVMDVLDHPDLQSLF
GEQSRAEVSVMGTLKLGSQEFAVSGRLDRLAIAGDTVTIADYKTNRDVPTSVADVPSVYR
RQLAIYRELLKPLYPGKQFRSVLIFTEGPAVRVLPDTMLDRSLEELATK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgacgccttcgggccggaggagaggacgcccaaggcgtggctcgactggacg
acggagcggcaatcgcttgcctccgacccggcccgctcggcatgggtctcggccaatgcg
ggctccggcaagacccatgtgctgacacagcgcgtcatccgccttctgctcgccggctgc
cggccttccgccatcctctgcctgacctataccaaggcggcggcttccgagatgtcgaac
cgcatcttcgagcgcctcgccgaatgggcgacgctcgatgatgccacgctcgaaaaacgc
atcgaggcggtcgagtgcaaacggcctccgcttgcgaagatccaggaagccagacgactc
tttgcaaaggcgctagaaacgcccggcgggctgaagatccagacgatccacgccttctcg
gaggctttgctccaccagttcccgctcgaggccaatgtggcgggacatttttcggttctc
gacgatcgtgccgcggcggtgctccttgccgatgcgcggcgcgccctgctgagcgcgacg
gccgccgagggcgagaccgagcttgccgaggccttcgcgacagtgctcgacctcgccgac
gataccggccttgaaaaactgcttcaggcgatcgtcgcgaaccgggcatcgattcaggcc
tttctcgaccacgcctccggacaaggcgggcgggagccgcaattgcgtgcggcacttggt
cttgcagccggagaatcggccgacagtgtcatggccggggcctggccgctggccggcctc
aatggcgcggcgctcgaacactatatcgggctggcgctcagccacggcggtgtgaagccg
tgcgaaattgcggaaggcctgaaggcggtccgcgacacgcccggtgcggaagaacggttt
gccaagctctcgagcgtcttcttcaacggcggcggcaagccgaaggccgagtctgcgttt
ttcaacaaggtgatgctggcgcaggcgccgcagctgacaccgctgatcgacgaggcccgc
aggcatatcgtctccactgccgatcggctgagcattgtgcggatgtacgaggcgacgcgg
gcggcgctgatcctcgcggaacgactcaacagggactatgaagagctcaagaagcgacgc
agccagctcgatttcgaggacctgatcaaccgcacggcggcgctgctttcccgcagcgac
gtcggcgcctgggtccactacaagctcgaccagggcatcgaccatattctcgtcgacgag
gcgcaggacacgagcccggcgcaatggacgatcatccaggcgctcgctgccgacttcttt
gccggcgaaacggcgcgtggcgacgaccggacgatctttgcggtcggcgacgagaaacag
tcgatctattccttccagggcgcgcggcccgagcgcttttcgcgcgagagcgtgctgacc
gagcggcgggtgcgcgccggcaaccgatacttcagccccatccgcctgcagctctccttc
cgttcgaccgtcgacgtgctttccgccgtcgatacggtctttgccaatccgggcaatgcc
aaaggcttgagcgcccggaacgaggcggtcgtgcacgcctcgaaccgaatcggacatccc
ggagcggtcgacatgtgggacgtcatcgcgcccgagccgaccacgtccgaagaggagtgg
acggcgcccttcgacgcgacgccggagcgcgccccggtcaacattctcgcccggcgcatc
gcagctgtgctcgagacgtggatcggcagggagacggtgatcgacaaaggcgtccgtcgg
ccgatgcggcccggcgacgtgatcgtgctggtgcgcaagcgcgatgccttcgtcaacgcc
ctgacgcgcgcgttgaagcgccgcggcaatattccggtcgccggcgccgaccggctggtg
ctgaccaaccacatcgccgttcaggacctcctggcgctcggccgcttcgtgctcctgccc
gaggacgacctgtcgctcgccgcgctgctgaagagcccgctcgtcaatctcggcgaggac
gacgtcttcgaactggcggcgcgccgggccgcgggcgaaagcctgtggcagcggctgcag
cagctcggcgcggaggaagcaagccgatatcaccgggtcgtgcggattctcgccggctat
ggcgaactcgcccgcgacctgctgccgcacgacttctatgcccgcgtgctcggggccaac
ggcggccgccgagccttcctggcgcggcttggcagtgaggtcagcgacattctcgacgaa
ttcctcaccttcgcgctcgaccaagagcggagcggcctgcccgggctgcaggccttcatc
tcgacgctcgaaatcgaagcgccgacggtcaagcgcgagcaggacaaggaacgcgacgag
gtgcgcgtcatgacggtgcacgccgccaagggcctcgaggcgccggtcgtcctcctggtc
gacggcggcggcgaggcgttcgtccgccagcaggtctcggacctgcgcttcctggaaaag
caacaggccgacgggtcgatcgtcagcgtgcccgtctggcgcgcgcccggttcggcgtcg
aattcgctgatctccgaagacaacgagcgcctgaagcgattggcggaggaagaatatcgc
cgcctcctctatgtcggcatgacgcgcgcggcggaccggttgatcgtctgcggctatcgc
ggccagcggcaaaacctcgacacatggcatgccatggttcaggggacgctgtcgcacgac
ccgaaaggcagggcaacgccgatggtgttccgcgccggcggcgaggaatggacgggccat
gcgtggcgtgaagcgcctgtgccggtgaccatcccggggagtggcgaggcgggaagcaag
ccggaagcgatggcatccgacctgccgagggcgcttttcgcgcccttgccggcgcagcgc
cgcctaccgcggccgctcgccccttcgggaacgagcgtcgccatcgacgatccggatcaa
gaggcgatcgtcggctcggcgctgtttgcggcgcaggccacgcccaaattctcgatgctg
cgcggcgccatcctgcatcggctgctgcaggtgcttccgacgatcgacggtgccgtgcgc
cgcgacgcggcgaaacgctatctggcgcgcgctgtgccgagttggccggacgcggagcgg
cggacgctcaccggggccgtgatggacgtgctcgatcatccggacttgcagtcgcttttt
ggcgaacagagccgtgccgaagtgtccgtcatgggaacgctcaagctcggcagccaggag
ttcgccgtatccggccggctcgaccgcctggcgattgccggcgacacggtgacgatcgcc
gattacaagaccaatcgcgacgtgccaacctcggtcgccgacgttccatccgtctaccgc
aggcagctcgccatctatcgcgagctgctgaagccgctttatccgggcaagcagttccgc
tcagtgctgatcttcaccgagggtccggcagtgcgggtgcttcccgacacgatgctggat
cggagccttgaagagctcgcgacaaagtga
DBGET
integrated database retrieval system
