Sinorhizobium fredii HH103: SFHH103_03533
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Entry
SFHH103_03533 CDS
T01731
Name
(GenBank) Double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sfh
Sinorhizobium fredii HH103
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfh03400
]
SFHH103_03533
Enzymes [BR:
sfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFHH103_03533
DNA repair and recombination proteins [BR:
sfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SFHH103_03533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CCE98024
UniProt:
G9A490
LinkDB
All DBs
Position
complement(3840973..3844152)
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AA seq
1059 aa
AA seq
DB search
MPGHASNVFTIPAGLPFLKTLAEKLVSGVLTPDFQYDPADPLALAGVTIFVPTRRAARVL
RSEFVDLLGGRSAILPVIRPLGETDDDSGFFDAEVPAILDLAPPLSGTARLIELGRLILA
WRNRLPQVVLDIHAESPLIAPASPADAIWLARNLAELIDAIETEELDWDALDGLDAGEHA
LWWQLTLAFVKIARTYWPERLNELKHSSPARHRNAMLKAETQRIAAGKVSGPIIIAGSTG
SIPATAALIAAVKALPNGTIVLPGLDLMMSEAEWELIAEVPASGPAARGPASRTHPQYGF
HRLLKRMRIERRDVPVLGSLDDDLGYRGAVLSRALLPAEATDGWTEARDGFEPEKLLAAF
ADVALIEAANEREEATAIAIALRLALEGDEDSQAALITPDRGLARRVGAELARFGIEADD
SAGVPLSATAAGALARLLIEATLRPDDPVALVALLKHPLARFGQTAEDARRAADVLELLA
LRGGTDLSDISALETVLDKALARQSTERHPRPWRGGIDPDGIGLARALARRISTAVEPLT
STIAGGSEGGRHHSMVLTLADWAERTGRALEAVAIDERGSLGGLWGSEAGETLATLLRGI
IETDGQMEADGRQWCDIVEALAASEAVKPRSMRHRRVFIFGALESRLQSVDLVVLGGMNE
GTWPGQTSNDPFLSRTMKSGIGLEPPERRIGQLAHDFQMACGTRRLILSRSMRQGSAPTV
ASRWLQRLQALGGKTLTERLKANGADYLHWMRILDEGERQPLSERPQPKPPAELQPRKYS
FSEVTRLRRDPYAIYARRILRLEPIDSFNRDPGAAERGLLYHRIVDRFVKGGFDPASRDG
EEAMVWLIREAFDEEKLPAHIDTIWRPRFEAVARTFLSWEQERRHGIVRSFTEVPAGMDI
GVADIRLTGIADRLDRLTDGTVDIIDYKTGSSPSAREARALLDPQLALEAAALKAGAFGA
IGPARPHALHYVRLKPGSRFVVDTVNNENSKSKETKSADQLAEESFAELRKLLAALTSGK
YGFASRLIVQKERDYGGEYDHLARVAEWATADGEDDDEE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
ttgcccggccacgcttccaacgtcttcacgattcccgccggtctgcccttcctgaaaacg
ctggcggaaaaactcgtgagcggcgtgctgacgccggatttccaatacgatccggccgac
ccgctggcactcgccggcgtgacgatcttcgtgccgacgcggcgagcggcccgcgtcctg
cgatcggaattcgtcgacctgctcggcggccgctcggcgatcctgccggtgatccgcccg
cttggcgagacggacgacgacagcggcttcttcgatgccgaggtgccggcgatcctcgat
ctggcgccgccgctctccggcaccgcacggctgatcgagctcggcaggctgatccttgcc
tggcgcaatcgcctgccgcaggtggtcctcgacatccatgccgaaagcccactgatcgcg
ccggcaagcccggccgacgccatctggctggcgcgcaatctcgccgagctgatcgacgcg
atcgagacggaggagctcgactgggacgcgctcgacgggctcgacgccggcgaacatgcg
ctctggtggcagttgacgctggccttcgtgaagatcgcccggacctattggccggagcgg
ttgaacgagctcaagcattcctcgccggcgcggcatcgcaacgcgatgctcaaggccgaa
acgcagcgcatcgccgccggcaaggtgagcgggccgatcatcatcgccggctcgaccggc
tcgatccccgcgaccgccgccctgatcgccgcggtgaaggcgctgccgaacggcacgatc
gtgcttcccggcctcgacctcatgatgagcgaggcggaatgggagcttatcgcagaggtc
cccgcttcgggcccggctgcaagaggcccggcaagccgcacccatccgcaatatggcttc
caccgtcttctgaagcgcatgcgtatcgaacgtcgcgacgtgccggttctggggtcgctc
gacgatgacctcggctatcgcggcgcggtgctgtcgcgggcgctgctgccggccgaggcc
accgacggctggactgaggcgcgcgacggcttcgagccggagaagcttcttgcggccttc
gccgacgtggcgttgatcgaggcggcgaacgaacgcgaggaagcgaccgcgatcgcgatc
gcgctccggctggcgctcgaaggcgacgaagacagccaggcggcgctgatcacgcccgat
cgaggcctggcccgtcgcgtcggggcggagctcgcccgattcggcatcgaagccgatgat
tccgccggcgtgccgctttcggccaccgcggcaggcgcgcttgcgcggctgttgatcgag
gcgaccctccggcccgacgatccggtggccctggtggcgctgctcaagcacccgctcgcc
cgcttcggccagacggcggaagacgcccggcgggcggccgatgtgctggagctcctggcg
ctgcgcggcggcaccgacctttccgatatctccgccctcgaaaccgtgctcgacaaggca
ctcgccaggcagagcaccgaacggcatccgcggccctggcgaggcggcatcgatccggac
ggtatcggcctcgcgcgggcactcgcccggcgcatttcaacggccgtcgagccgctgacg
agcacgattgccggcggctcggaaggcggccgccatcactccatggtcctgaccttggcc
gattgggcggaacgtaccggtcgggcgctggaagccgtcgccatagacgagcgtggcagc
ctcggcgggttgtgggggtcggaagccggcgaaacattggcgacgctgctgcgcggtatc
attgagaccgacgggcagatggaggccgacgggcggcaatggtgcgatatcgtcgaggcg
cttgccgccagcgaagcggtcaagccgcgatcgatgcggcaccggcgcgtcttcattttc
ggggcgctggaatcacgtctgcaaagcgtcgatctcgtcgtgctcggcggcatgaacgag
ggcacctggccgggacagacctcgaacgacccgttcctgtcgcggacgatgaaatcgggc
atcggcctcgaaccgccggagcggcgcatcggccagctcgcccatgactttcagatggct
tgcggaacgcgccgtctcatcctgtcccgctccatgcgccagggctccgccccgacggtc
gcctcgcgctggctgcaacgcctgcaggcgctcggcggcaagacgttgaccgagcggctc
aaggcgaatggcgccgactatcttcactggatgcgcatcctcgacgagggcgagcgccag
ccgctcagcgagcgaccgcagccgaaaccgccagccgaattgcagccacgcaaatactcg
ttcagcgaggtgacacgacttcgccgcgacccctatgccatctatgcgcgccgcatatta
cggctggagccgatcgattccttcaaccgtgatccaggcgccgccgaacgcggcctgctc
taccaccggatcgtcgaccgcttcgtcaagggcggtttcgaccccgcctcccgcgatggg
gaagaagcgatggtttggctgatccgggaagccttcgacgaggagaagctccccgctcac
atcgacacgatctggcggccgcgcttcgaggcggtggcgaggacatttctttcctgggag
caggagcgccgccacggcattgtcaggtcattcaccgaagttcccgctggcatggacatc
ggcgtcgcggacataaggctgaccggcattgccgaccgcctcgaccggctcacggacggc
accgtcgacatcatcgactacaagaccggctccagcccctcggccagggaagcacgggcc
ctgctcgacccgcagctggcgctcgaagcggcggcgctcaaggcgggcgccttcggcgcg
atcggcccggcccggccgcatgcgctgcattatgtgcgcctgaagcccggcagccgcttt
gtcgtcgatacggtcaacaacgagaacagcaagtcgaaggagaccaagtccgccgaccag
ctggcggaggaatcgtttgccgaactgaggaagctgctcgccgcgctgaccagcggaaaa
tacggcttcgcctcgcgcctgatcgtccagaaggagcgggactacggcggcgagtatgac
cacctggcgcgcgtcgccgaatgggcgacggctgacggggaggacgacgatgaggaatga
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