Sinorhizobium fredii HH103: SFHH103_03804
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Entry
SFHH103_03804 CDS
T01731
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfh
Sinorhizobium fredii HH103
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfh03016
]
SFHH103_03804 (truB)
Enzymes [BR:
sfh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SFHH103_03804 (truB)
Transfer RNA biogenesis [BR:
sfh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SFHH103_03804 (truB)
Prokaryotic type
SFHH103_03804 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CCE98295
UniProt:
G9A5H4
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All DBs
Position
4144700..4145635
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AA seq
311 aa
AA seq
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MSKPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERSTDDLEGDVVRASAERPNEEAIRALLPKYTGVI
SQVPPQFSAIKIDGERAYDLARDGETVEIPAREVEVFRLALIGSTPHLAHFEIECGKGTY
VRSLARDMGRDLGCFGHIASLRRTFVAPFGEEDMVALADLVALEKIEDDAERLAALDDYL
IDTGEALSDLPHVAVSDDQAHRLRMGNPVILRGRDAPLPTPEAYATARGKLVAIGEVAEG
EFRPKRVFASH
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgcgcaaacccaagggccgcccgatctcgggctggctgatcctcgacaag
ccgctcgatttcggctctaccgaggcggtctccaagatcaagtggctgttcaaggcgcag
aaggccggtcatgccggaacgcttgatccgctggcctccggcatgctgccgattgcgctg
ggcgacgccacgaagaccgttccctatgtcatggacggccgcaagatctacgagttcacc
gtggcctggggcgaggagcgctcgaccgacgacctcgagggcgacgtcgttcgcgcctct
gccgagcgtccgaacgaggaggcgatccgtgccctgctgccgaaatataccggcgtgatc
agccaagtgccgccgcagttctcggcaatcaagatcgatggcgagcgtgcatacgatctt
gctcgcgatggcgagaccgtcgaaattccggcgcgcgaggtggaggtcttccgtctcgcc
ctgatcggcagcacgccgcatctcgcccatttcgagatcgaatgcggcaagggcacctat
gtccgttcgctcgcccgcgacatgggccgcgatctcggctgcttcggccatatcgcctcg
ttgcgccgcacctttgtcgcccccttcggggaggaggacatggtcgcgctcgccgatctc
gttgcgctggaaaagatcgaggacgatgcggaacgccttgccgccctcgacgattatctg
atcgataccggcgaggcgctttccgatctgccgcatgttgcggtcagcgacgatcaggcg
caccggctcaggatgggcaacccggttatcctgcgcggtcgagacgcgccgctgccgacg
cccgaggcctatgcgaccgcgcgcggcaagctcgtagcgatcggcgaggtcgccgaaggt
gaatttcgaccgaaacgtgtgttcgccagccattga
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