Sinorhizobium fredii HH103: SFHH103_05184
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Entry
SFHH103_05184 CDS
T01731
Name
(GenBank) ATP-dependent DNA ligase
Organism
sfh
Sinorhizobium fredii HH103
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Ortholog
Paralog
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
DUF5959
Motif
Other DBs
NCBI-ProteinID:
CCE99650
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Position
pSfHH103e:complement(356191..358653)
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AA seq
820 aa
AA seq
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MATTKLEAYRKKRDFSKTPEPVGSPAGGGNRFVVHKHHATADHYDLRLEVGGVLKSWAVP
KGPSLNPADKRLAVETEDHPIEYIDFEGVIPEGEYGAGPMIVWDTGVWAPMDDVEESLGK
GAFKFRLAGEKLKGGWMLTRLKPRPGEDDHRHWLLFKERDPAADPTTDILAARPESVKSG
RRIEELVDRPKPAAKAAKLKPGALHGAAKATMPTRMEPQLATQTAVPPGSAPGREVWLHE
IKFDGYRTMAHLAGGEVRLITRGGLDWTRRYGDLPEAFRHLPCRESVIDGEIVVLDEEGV
SRFALLQEALSTGAGNRLVFYAFDLLHLDGWSLANVPLEKRKALLKQLLAAQLSSRSAIQ
FSDHVVGDGRAFYEHASELGLEGIISKRASAPYQSGRSKTWTKTKALKAEDFVIAGYTLS
EAAEGLAALALGEWIDGELQYRGKVGTGFDAETLKQLLVRLEPLRAGAAKLEGAPKEIIW
VRPVLRARIHYGNRTADNILRHAVFQGLRDVDLSTPASPERKRLISDADLAGISITNPTR
RLFGKSGPTKLDLALYYAMVGDFMLPHILGRPVSLVRCPTGKFEDCFFQRHPFTGMPPSV
TGFDAMSSEGEAKRYLSVEDAKGYLALAQFGVVEFHSWGSTRAQLEKPDRVVFDLDPGEG
IGWREVVEAAIHIKAELEALGLVPFVKTSGGKGVHVVVPIRPKRDWKKVHKATGDVASHL
AATAPESFVTAMGKGKRVKRIFIDFHRNARGHTAAAPYSLRARTNLPASTPLSWADLETI
DAPEDLNYSSLPGLLATSGDPWADIDDCARDLPILSNAEK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacgaagcttgaggcctaccgcaagaaacgggatttttcgaaaacgccggag
ccggtcggcagccccgccggcggcggcaaccgtttcgtcgtgcacaagcatcatgcgacc
gcggaccactatgatctcagacttgaggtcggcggcgtgctgaagagctgggcggtgccc
aaaggcccctcgctcaatccggccgacaagcgcctggcggtggagaccgaagatcatccg
atcgaatatatcgacttcgagggcgtcatccccgagggcgaatatggcgccggcccgatg
atcgtctgggacaccggcgtctgggcgccgatggacgacgtcgaggagagcctgggcaag
ggcgctttcaagtttcgcctcgccggcgaaaagctcaagggcggctggatgctgacccgg
ctgaagccgcggcccggcgaagacgaccatcgccactggcttctcttcaaggaacgcgac
ccggccgccgatcccaccaccgatattctcgccgcccggccggaaagcgtcaaatccggc
cggcggatcgaggagctcgtcgacaggccgaaacctgcggccaaggcggcaaaactcaag
ccgggcgcacttcacggcgcggcgaaggcgacgatgccgacacgcatggagcctcagctt
gccacgcagacggcggttccgccgggcagcgcccccgggcgcgaagtctggttgcatgag
atcaagttcgacggctaccgcaccatggcgcatctagccggcggcgaggtgcggctgatc
acccgcggcggcctcgactggacgaggcgctacggcgacctgcccgaggccttccggcac
ctgccgtgccgcgagtctgtcatcgacggcgagatcgtcgtgctcgacgaggaaggcgtc
agccgcttcgcgctcctccaggaagcgctttccactggtgccggcaacaggctggtgttc
tatgccttcgatcttctccatctcgacggctggagcctcgcgaatgttccgctcgagaag
cgcaaggcgctgctcaagcaattgctggcggcgcaattgtcgagccggtccgccatccaa
ttcagcgatcacgtcgtcggcgatggacgcgccttttacgaacatgcctcggaactgggg
ctagaggggataatctccaagcgtgcctcggccccttatcagagcgggcgttccaagaca
tggaccaagaccaaggcgctgaaggcggaagatttcgtaatcgccggctacacgttatcc
gaggccgcagaaggtcttgccgcgttggcgctcggcgaatggatcgacggcgagctgcag
tatcgcggcaaggtcggaaccggcttcgacgccgaaacgctgaaacaattgctcgtacgg
ctggagccgctcagggcgggtgcggcgaagctcgagggggcgccgaaggagatcatctgg
gtccggccggtcctgagggcgcgtattcactacggcaaccgaacagccgacaatatcctc
cgccatgcggtgttccaggggctgcgcgacgtcgacctctcgacgccggcttcccccgag
cgcaagcggctgatctccgacgccgacctcgccggcatctcgatcaccaatccgacccgg
cggctgttcggcaagtcggggccgaccaagctcgatctcgccctctattatgccatggtc
ggcgatttcatgctgccgcatatcctcggccgcccggtttcgctcgtccgctgcccgacg
ggcaagttcgaggattgcttcttccagcgccatccctttaccggcatgccgccttcggtg
acaggtttcgacgcgatgagctcggaaggcgaggcgaaacgctacctttcggtcgaggat
gccaaaggctacctggcgctggcgcaattcggcgtcgtcgaattccactcctggggctcg
acgcgggcgcagctcgagaaacccgaccgcgtcgtctttgacctcgaccccggagaaggc
atcggctggcgcgaagtggtcgaagcggcaattcacatcaaggccgagctcgaggcactc
ggtctcgtccccttcgtcaagacgtcgggcggcaagggtgtccatgtggtcgtgccgatc
cggccgaagcgcgattggaagaaggtgcacaaggcgaccggcgacgttgcttcccacctg
gcggcaacggctcccgagagcttcgtcactgcgatgggcaagggcaagcgcgtcaagcgc
atcttcatcgacttccaccgcaacgcccgcgggcacacggccgcggcgccctattcgctg
cgcgcccgcacgaatctgccggcctctacgcctttaagctgggccgatcttgagactatc
gacgctcccgaggatttaaattattcttcgttgcctggcctcttggccacgtccggcgat
ccctgggccgatatcgacgactgtgcacgggatttgcctatactttccaatgcggagaag
taa
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