Sinorhizobium fredii HH103: SFHH103_05260
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Entry
SFHH103_05260 CDS
T01731
Name
(GenBank) GroEL family protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFHH103_05260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfh03019
]
SFHH103_05260
03110 Chaperones and folding catalysts [BR:
sfh03110
]
SFHH103_05260
03029 Mitochondrial biogenesis [BR:
sfh03029
]
SFHH103_05260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfh04147
]
SFHH103_05260
Enzymes [BR:
sfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SFHH103_05260
Messenger RNA biogenesis [BR:
sfh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SFHH103_05260
Chaperones and folding catalysts [BR:
sfh03110
]
Heat shock proteins
HSP60 / Chaperonin
SFHH103_05260
Mitochondrial biogenesis [BR:
sfh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SFHH103_05260
Exosome [BR:
sfh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SFHH103_05260
Exosomal proteins of other body fluids (saliva and urine)
SFHH103_05260
Exosomal proteins of breast cancer cells
SFHH103_05260
Exosomal proteins of colorectal cancer cells
SFHH103_05260
Exosomal proteins of bladder cancer cells
SFHH103_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Cas_Csn2
Motif
Other DBs
NCBI-ProteinID:
CCE99726
UniProt:
G9AF94
LinkDB
All DBs
Position
pSfHH103e:435371..437011
Genome browser
AA seq
546 aa
AA seq
DB search
MTAKDIRLGFQARDSMLHGIDTLARAVAVTLGPRGRNVAIHRPFGTKITKDGVSVAREIE
LEDRFEDMGIQLLRQVAIRTSHQAGDGTTTAVILADAILRGGVRAVAAGMNPMDVKRGID
RAVEAVGAALQQNARPVASDNEIKQVATNSANGDQEIGQIIAEAMARVGYDGVIMIEEGR
SLETETEITTGIQFDRSYISPYFVTNRNKMWVEMEDAFVLVCEKKLSSLGEILPLLEQVL
QADKPLLIIAEEIEAEVRAALVVNRLRGGLKVAAVKAPAYGELRKAILQDIALLTGGTVI
SEDLGLKLETISLDDLGRAQKIRIDKQNTTIAEGGGSSAEITARIAAIKAQLELSTSDFD
REKLQERLARLSTGIAVVRVGGATESEVREKKDRLRNAMHATRAAVEEGILPGGGVALLR
ASKAIQTLKAGNPDQQAGIDIVKEALTWPAKQIASNAGEDGSVVAARILQSDDYGWGYQA
QAGIFCDLLVAGIVDPAKVVRTALVGAASMAGLMIMTEAIVAEVPGPPPPELPGHHDHED
NLDIEF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaaggacatcaggcttggcttccaggcacgcgacagcatgctgcatggcatc
gatacgcttgcccgcgccgtcgcggttacgctggggccgcgcggtcgaaacgttgccatc
caccgcccgttcggcacgaagatcaccaaggacggcgtctcagtcgcgagagaaatcgag
ctagaagacaggttcgaggacatgggcattcaattgctcaggcaggtcgccatcaggacc
tcccatcaggctggcgacggcacgacgacggcggtaatcctcgccgacgcaatcctcagg
ggcggtgtccgcgcagtcgctgccggcatgaatccgatggacgtgaagcgcgggatcgat
cgcgccgtcgaggccgtcggcgcggcgttgcaacagaatgcaaggcctgttgcctcagat
aacgaaatcaagcaggtcgccacgaattcggcgaacggagaccaggagattggccagatc
atcgccgaggcgatggcgagggtcggttacgacggcgtgatcatgatcgaggaaggtaga
tcgctcgaaaccgaaaccgaaataacaaccgggattcagttcgaccgcagctacatctcg
ccttacttcgtcaccaatcgaaacaagatgtgggtggagatggaggacgcgtttgtcctt
gtttgcgagaagaagctctcgagccttggcgaaatcttgccgcttctggaacaggtcctc
caggccgacaagccgcttctgatcatcgccgaggagatcgaggctgaagtcagggcggcg
ctggttgtcaacaggctccgcggcggcctcaaggtggcagccgtcaaggcgccggcctat
ggcgagctccgcaaggccatcctgcaagacatagcactgctcactggcggaaccgtcatc
tccgaggatctcggcctgaagctcgagaccatatcgctggacgatctcggccgcgcccaa
aagatcaggatcgacaagcagaataccacgatcgcggaaggaggcgggtcaagcgcggaa
atcactgcgcggatcgctgcgatcaaggcgcagctcgaactatccacgtccgactttgat
cgggaaaaactccaggagcggctggcgcggctctccaccgggatcgccgtcgtccgagtc
ggcggtgcgaccgagtcggaggtcagggagaagaaggaccgtctccgtaacgccatgcat
gccacccgcgccgccgtagaggagggaatcctgccgggcggcggcgtcgcactgctgcgc
gctagcaaggcaatccagacgctgaaggctgggaaccccgaccagcaggccggcatcgac
atcgtcaaggaagcgctaacctggccggcgaaacagattgcgtccaatgcgggcgaggac
ggctcggtcgtcgccgctagaattctccagagtgatgattacggctggggttaccaagcg
caggccggaatcttttgcgacctgctggtggcgggcatcgtcgatcccgccaaggtcgtg
cgcacggcgctggtgggagccgcctccatggccggtctgatgataatgacggaagcgatc
gttgccgaggtgcccggcccaccgccgcctgagcttcccggccatcatgaccacgaagac
aatctcgacatcgagttctga
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