Sinorhizobium fredii HH103: SFHH103_05287
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Entry
SFHH103_05287 CDS
T01731
Name
(GenBank) RND efflux transporter
KO
K07788
multidrug efflux pump
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFHH103_05287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfh02000
]
SFHH103_05287
Transporters [BR:
sfh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SFHH103_05287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF4262
DUF5959
Motif
Other DBs
NCBI-ProteinID:
CCE99753
UniProt:
G9AFC1
LinkDB
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Position
pSfHH103e:complement(464249..467362)
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AA seq
1037 aa
AA seq
DB search
MSISEFCIRRPVATLLMSLALIFAGLFAYAALPVAALPRTEFPVINVSATLPGASPETMA
TSVATPLIKQFNTIAGIDSISTNNSLGATSISIQFALDRDIDAAAADVQAAITRTLRTLP
QDMPSPPSFRKVNPADAPVLLLALKSDTVPLTKLDAFAQQVISPSLSTLEGVAEVSIFGS
QQFAVRIEIDPGALAARGISLTQLQAAIAAANDNSPLGTVQSTGRQMTIIADTQLQNAAA
FSKLIIKTADGKAVRLGDVTKVIDSVANTQTASWHDGSRAIILAIQRQPDANTVAVVDKV
KSMLPTFQQSLPAGASLEMLNDRSVSVRGAVDDVEFTLGLTIGLVILVIFVFVRRLSATL
IPALAVPISIIATFAAMYALGFSIDNISLMALTLSVGLVVDDAIVMLENIVRHMEEKGQS
AFEAAIAASGEIGFTIIAISLSLVAVFIPVLLMGGVIGKIFNEFAIVVTISILASAFVSL
TLTPMLAARLPHKPAEQDDRHGLDALLERGFDTLLRGYERLLTLCLRARLTVLVLFLASI
GVTVYQVSATPKGFFPQEDIGQLQVTTQARTDISFAAMSALQAKVEDVFARSPYVAHVAS
SIGSGGAGSSALNSGRLFVELKPKTERPALPRILSELRPALANIPGIRSYITPVQNLSVG
ARSSASQYQLVVQGLDQATMNAWADKLTEAMRQERAFFTDVSTDLENNAPQARLVVDRDK
AAALGISTDVLRSSLYGGFGSEQISTIYTSGDSYEVIMEVDPAKSWSAATLAELQVPTAD
NRLVPLGAFARVDTVPGPLTVNQLGQLPAVTISYNLPTGVALGNSVEEIGRLKAEIDMPP
DVTTRFYGTAQLFQDAVSNQAWLILGAILTIYIVLGILYESFIHPLTILSGLPSAASGAL
VAISFGGFDLSIIAVIGLLMLIGIVKKNAIMMIDVALSLKRNGMSAAEAIHRACLMRFRP
ILMTSLAALMGTLPIALGSGASAELRQPLGVAVVGGLLVSQPLTLFVTPVIYLYMESLAG
GIKRLFGRRPLSQAAIP
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatttccgaattctgtatccgccgcccggtcgcaacgctgctgatgtcgctggcg
ctgatcttcgccggcctctttgcctatgcggcgcttcccgtcgcggcgctgccgcggacc
gaatttccggtgatcaacgtctccgcaaccctgcccggcgcttcaccggagacgatggcg
acttccgtcgcaaccccgctcatcaagcagttcaacaccattgcggggatcgacagcata
tcgacaaacaattcgctcggcgcgacgtcgatctccattcagttcgcgctcgaccgcgat
atcgatgcggcggctgccgacgtccaggcggcgattacccggacgctacgaaccctgccg
caggacatgccctccccgccgagcttccgcaaggtcaacccggccgatgcgccggtgctg
cttctcgccttgaagagcgatacggtgccgctcaccaagctcgatgccttcgcccagcag
gtgatctcgccatcgctttcgaccctcgaaggggtcgcggaagtctcgatcttcggcagc
cagcaatttgccgtgcgcatcgaaatcgatccgggtgcccttgccgcgcgtggcatctcg
ctgacgcagttgcaggccgccattgccgccgccaacgacaattcgccgctcggcacggtg
cagtcgaccggacggcagatgacgatcattgccgacacccagttgcagaatgctgccgcc
ttttcgaagctgatcatcaagacagccgatggcaaggcggtccggctgggcgacgtcacc
aaggtgatcgactctgtcgccaacacccagacggcgagctggcatgatggctcgcgcgcg
atcatcctcgccatccagcgccagcccgacgccaatacggtggcggtcgtcgacaaggtg
aagtcgatgctgccgacattccagcaatccctgccggccggtgcgtccctggaaatgctc
aacgaccgctccgtctcggtgcggggtgcggtcgacgacgtcgagttcacgctcggcctg
accatcggactggtgatcctggtgatcttcgtcttcgtgcgccgcctctcggcgacgctc
attccggcgctcgccgtgccgatctcgatcatcgccactttcgcggcgatgtatgcgctg
ggcttttcgatcgacaacatctcgctgatggccctgaccctctccgtcggcctcgtcgtc
gacgacgccatcgtcatgctggagaacatcgtccggcacatggaggaaaagggacagagc
gccttcgaggcggcgatcgccgcctcgggcgagatcggcttcaccatcatcgcgatctcg
ctgtcgctggtcgcggtcttcattcccgtcctgctgatgggcggcgtgatcggcaagatc
ttcaacgagttcgccatcgtcgtcaccatttcgatcctcgcctccgccttcgtctccctg
acactgacgccgatgctggcggcgcgtttaccccacaaacccgccgaacaggacgacagg
cacggcctcgacgcgctgctcgagcgtggtttcgatacgctgctgcgcggctacgaacgg
ttgttgaccttgtgcctccgcgctcgccttaccgtgcttgtcctgttcctggcgagcatc
ggcgtgacggtctatcaggtcagcgccacgccgaaggggttcttcccgcaggaggatatc
ggccagcttcaggtgacgacgcaggcgcggacggatatttccttcgccgccatgtcggcc
ctgcaggccaaggtcgaagacgtgttcgcccgctcgccctatgtcgcccacgtggcaagc
tcgatcggttcgggcggcgccggatcgtccgccctgaactccggaaggctcttcgtcgaa
ttgaagccgaagactgagcgcccggcgctcccccggattctttccgaactgcgtccggcg
ctcgccaatattcccggcatcaggtcttacatcaccccggtgcagaacctctccgtcggt
gcacgcagttccgccagccagtatcagctcgtcgtccaaggcctcgaccaggcaaccatg
aacgcctgggcggacaagctgaccgaggcgatgcggcaggagcgcgcctttttcaccgac
gtcagtactgacctcgagaacaatgctccgcaggcgcgcctcgtcgtcgaccgcgacaag
gcggcagccctcggcatttcgacggatgtgctgcgctcatctctctatggcggcttcggc
tcggaacagatctcgaccatctacacctcgggcgacagctacgaggtcatcatggaagtc
gatccggccaagagctggtctgccgccacgcttgccgaactgcaggtgccgaccgccgac
aaccggctggtgccgctcggcgccttcgcgcgcgtcgatacggttccaggcccgctgacg
gtcaaccagctcggacaattgccggcggtgaccatctcctacaacctgccgaccggcgtg
gcgctcggcaacagcgtcgaggaaatcggccgcctgaaagctgagatcgacatgccgccg
gacgtcacgacccggttctacggcaccgcgcagcttttccaggatgcggtctccaatcag
gcctggctgatcctcggcgcgatcctgacgatctatatcgtgctcggcattctctatgag
agcttcattcacccgctgacgatcctgtccggcctgccgtcggcagcctccggggcgctt
gtggcgatcagtttcggcggcttcgacctgtcgatcattgcggtcatcgggttgttgatg
ctgatcggcatcgtcaagaagaacgcgatcatgatgatcgatgtggcgctgtcgctgaag
cgcaacggcatgtctgccgcagaggcgatccaccgggcatgcctgatgcgcttccggccg
atcctgatgacgtcgttggccgcgctcatgggcacgctgccgatcgcgctcggcagcggc
gccagcgcagaactgcgccagccgctgggcgtcgccgtcgtcggcggcctgctcgtctcg
cagccgctgacgctgttcgtgacgccggtgatctacctctacatggagagcctcgccggc
ggcatcaaacggctgttcggcagacggccgctaagccaggcggctattccctga
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