Sinorhizobium fredii HH103: SFHH103_05619
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Entry
SFHH103_05619 CDS
T01731
Name
(GenBank) putative ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFHH103_05619
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfh02000
]
SFHH103_05619
Transporters [BR:
sfh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SFHH103_05619
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA
SMC_N
Rad17
AAA_22
SRP54
AAA_28
ORC-CDC6-like
ABC_ATPase
AAA_19
nSTAND3
AAA_16
AAA_14
CysA_C_terminal
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CCF00082
UniProt:
G9AGA0
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Position
pSfHH103e:complement(813387..814529)
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AA seq
380 aa
AA seq
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MRRRRPRSGRRPRLRFSKKRAGWTATPSNRHGSGGKTVTLKLENLEKSFGNFHAVKGVSF
SLAQGEVLSLLGPSGCGKTTTLRMIAGFEQPTAGTILLAGRDITHTAARHRNIGMVFQSY
ALFPHMSVADNVAFGLRMRGMARAKRDERVRTALDIVRMGKFAERSPKQLSGGQQQRVAL
ARALAIQPDILLLDEPLSALDLKLREEMRDEINRIVRELKITTVFVTHDQSEALVLSDYV
AVMNGGIVEQLDTPTRLYRNPETPFVADFIGGANVVKGAVAADTFKASGDIVIPLPCSAD
AAAKAIAIRPEDIRLSAPSAPGLSGVVEQSRFLGGTTEYVVRVSPAVALTVRNESYQPFK
NGDRVGLQVQPERIVCLRTN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaaggcgaccgaggtctggcagaaggccaaggctcaggttcagtaagaagcgc
gcgggttggacggcgacgccgtccaaccgccacggctcaggtgggaaaacagtgaccctc
aagcttgaaaatctcgaaaaatccttcggcaacttccacgccgtcaaaggcgtaagcttc
tcgctggcgcagggagaggtactgagcctgctcggaccgtccggttgcggcaagacgacg
acgttgcgcatgattgccggtttcgaacagccgacggcgggcacgatcctgcttgccggc
cgcgacatcacccacacggcggcgcggcatcgcaacatcggaatggttttccaatcctat
gcgctgttcccgcatatgagcgttgccgacaacgtggcctttggcctgcgcatgcgcggg
atggcgcgggccaagcgtgacgaacgggtgagaacggcgctcgacatcgtgcggatgggc
aagttcgccgagcgttcgccaaagcagctttcgggcggccagcagcagcgcgtcgccttg
gcacgggcactggcgatccaaccggacatcctcctcttggacgaaccgctttcggcgctc
gatctgaagctgcgcgaggagatgcgcgacgagatcaatcgcatcgtccgggaactgaag
atcaccacggtcttcgtcacccatgaccagagcgaagcgcttgtcctctccgactatgtc
gcggtgatgaacggcgggatcgtcgagcaactcgatacgccgacgcgcctctaccgcaat
ccggagacgccgttcgtggcggatttcatcggcggcgccaatgtcgtcaagggggcggtc
gcggccgacacgttcaaggccagcggcgacatcgtcatacccttgccctgcagcgccgac
gcggcggcgaaggccatcgccattcgaccggaggacatccgcctttcggcgccgtcggca
ccgggcctctccggcgtcgtcgagcagagtcgcttcctcggcggcacgactgagtatgtc
gtcagggtgtccccggcggtggcgctgacggtgcgaaacgaaagctaccagccgttcaag
aatggcgatcgcgtcggtctccaggtccagcctgagcggatcgtctgcctgcgtacgaat
tga
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