Sinorhizobium fredii HH103: SFHH103_05948
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Entry
SFHH103_05948 CDS
T01731
Name
(GenBank) Putative two-component hybrid sensor and regulator
Organism
sfh
Sinorhizobium fredii HH103
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_7
HATPase_c
HisKA
Hpt
PAS_9
PAS_8
DUF5397
OmpH
Motif
Other DBs
NCBI-ProteinID:
CCF00410
UniProt:
G9AH78
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Position
pSfHH103e:complement(1184121..1187090)
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AA seq
989 aa
AA seq
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MTKNTDTTHASCSDHTPAEQLEAALAAQARAEAARDSLLDGIESALEGFVLYDADDRMVA
FNSRFEELFSPRVVVGMRFEDLIRSAVEQGLAPVGELSVEEWVARRMERHRNPGPPFKLR
LNNGTWIRISEGRTRDGGLVGAYTDITELEEQREHLEELVKTTEAATARAEAAQRQLLDA
IESSLEGFALYDASDRLVVYNSRYRDFFSGPERAVLPAEPFAVETPGAPFELVIRTFAES
GLSPLDGQTVDEWIAQRLERHRNPRGPFNLMHKDGTTIRVSERKTSDGGTICVYSDITEL
EEHRHRLEELVAKRTAKLEQRTEQLRKSREELERARDVAEQASIAKSEFLANMSHEIRTP
MNGVIGIAELLEGTELSEQQRRYVSIILHSAETLMDLINDILDFSKIEAGRLELETIPFM
LRDTLGDTLQTLAKRAADKGLELACHIPPEVPDHLMGDPTRLRQIIVNLVGNAIKFTENG
EVVVDVTLVGEGDQGARLQFDVRDTGIGIPAAQQERIFEAFAQADTSTTRQYGGTGLGLA
IAAQLAEKMGGPMQLDSKPGVGSVFTFAADFVLAPEAQKARPVREAELRGRRVLVVDDNA
TNRQILEEIVVNWGMIPIVAVDGAAALNALEQSSGALPDLALLDVMMPRMSGFELAACMR
LRPALKETRIVMMSSAGRPSDEALLRKLDVSRLLVKPVKQSDLLNAITNALGFSMREDEV
EGSASPARLRTGLGLTVLLAEDGAVNRQVAVDLLTKRGHRVEAVGNGQEAVEAAEHGSYD
LVLMDVHMPVMDGLAATAAIRALARAECARLPIIALTASATPADRERCLAAGMDGYVTKP
FRASELFRVVEQYQPKPASAVAGPATAIPEQPAAAEASALDWDGALSNLDGDAALLRELA
AMFLVEYPKLTAAIDAAHAGGDAAELRRAAHTLKGAADVIGAGGVVTAAQRLANLGREGR
LEPVPEAQRALAAELDRLRPLLQRAASGA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaataccgacactactcatgcctcctgcagcgatcatacgcctgcggagcag
ctcgaagctgccttggccgcacaggcacgggcagaagcggcacgcgacagtcttttggac
gggatcgagtcagctttggaagggttcgttctttatgatgccgacgaccggatggtcgca
ttcaactcgcgcttcgaggaactgttttcccccagagtcgtggtgggaatgcggttcgag
gacctgatccgttccgctgtggagcaggggttggccccagtaggcgagttaagtgtggag
gagtgggtcgcgcgacgcatggagcgccaccgaaatccaggcccaccattcaagctgagg
ctcaacaacgggacatggattcgcattagtgaaggccggacccgcgatggcggtctggtc
ggtgcctataccgacattaccgaacttgaggaacagcgcgagcatctcgaggagctggtc
aagacaaccgaggctgcgacagcgcgcgccgaggccgcgcaaaggcagttgctcgatgca
atcgaatcttccttggagggcttcgcactctatgacgcctcggaccggctggtcgtctat
aactcgcgctaccgggatttcttttcagggccggagcgtgccgtcctgcctgccgaacca
tttgccgtcgaaacaccgggcgcgcccttcgagctcgtgattcgcacttttgcagaaagc
ggcctgtcgccgctcgacggccagacggtcgacgagtggattgcccagcgcctcgagcgc
caccgcaatccgcgcggaccctttaatttgatgcacaaggatgggaccactatccgcgtc
agcgagcgcaagaccagcgacggcggaacgatatgtgtctattcagacattaccgagctt
gaagagcaccgccatcgtctggaggagctggtggccaagcgcactgccaagctggagcag
cggacggagcaattgcgcaagtcgcgtgaggagcttgagcgtgcccgtgacgtggccgag
caggcgagcatcgccaagagcgagttccttgcgaatatgagtcacgagatccgcacgcca
atgaatggtgtgatcggcattgccgaactgcttgagggcaccgagctttcggaacagcag
cgcagatacgtctcgatcatcctccattcggccgagacgctgatggacctgatcaacgac
attctggacttttcgaaaattgaggccggccggctagagctcgagacgatccctttcatg
ctgcgcgatacgttgggcgacacgctgcaaactctcgccaagcgcgccgccgacaaaggc
ttggagcttgcctgccacatccctcccgaggtcccggatcacttgatgggggatccgaca
cggctacggcagatcatcgtcaatcttgtcgggaatgcgatcaagttcaccgagaatggc
gaggtagtggttgatgtcactttggtaggtgagggagaccaaggggcacgccttcagttc
gacgtgcgcgacacgggcatcggcattccagcagcgcagcaggagcgcatattcgaggct
ttcgcccaagccgacacctcgacgacgcggcaatacgggggcaccgggcttggcctggcg
atcgccgctcaacttgccgagaagatgggcggaccgatgcagctcgacagcaagccgggc
gttggcagcgtcttcactttcgcagccgatttcgtgctcgcgccggaggcgcaaaaggca
cgcccggtgcgcgaggcagaattgcgcggacggcgcgtattggtggtcgatgacaacgcc
accaatcgccagatcctcgaggaaatcgtcgtcaattggggcatgatcccaatcgtcgca
gtggacggagcggcggcgctcaatgcactcgaacagtcatctggtgcgctaccggatctc
gcactcctcgacgttatgatgcctcggatgagcggcttcgaacttgcggcctgcatgcga
ctgcgcccagctctcaaggagacacgaatcgtcatgatgtcctccgccggtcggccgagc
gacgaggcgctgctgcgcaagctggatgtctccagattgcttgtgaagcctgtaaaacag
tccgatctcctgaacgcgatcaccaacgcacttggcttctcgatgcgggaagacgaggtc
gagggttctgccagcccggcgcgcctgcggacgggcctggggctcaccgtgctgcttgcc
gaggacggggcggtcaaccggcaggtcgcggttgatctgctgacgaagcgcggccatcgc
gtcgaggcggtggggaacggtcaagaggcggtcgaagcggctgagcatggcagttacgat
cttgtgctgatggatgttcacatgccggtgatggacgggctcgccgcgaccgccgcgatc
cgcgcgctcgctcgagccgagtgcgcccgtttgccgatcatcgcactgactgcgagcgcg
acgccggccgaccgcgagcgctgtctagcggcaggaatggacggttacgtgacgaagccg
ttccgcgccagcgaactcttccgcgtcgtcgaacagtatcaacccaagccggcatccgct
gtggccggaccggcaaccgccatcccggagcagccggcggctgcagaagcgtccgcgctg
gactgggatggcgctctcagcaatcttgacggcgacgcggcgctcttgcgcgagttggcg
gcaatgttccttgtcgaatacccgaaactgacggctgccatcgacgcggcacatgccggc
ggcgatgccgcggagttgaggcgcgcagcacacacactgaaaggcgcggcggatgtgatc
ggtgccggcggcgtggtgacggcggcacaacggctggcgaatctaggccgcgaaggcagg
cttgaacccgttcccgaagctcaacgtgcgttggcggctgaactggatcgcctgcggccg
ctacttcagcgagcagcatcgggcgcctga
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