Sinorhizobium fredii HH103: SFHH103_05954
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Entry
SFHH103_05954 CDS
T01731
Symbol
capD
Name
(GenBank) putative nucleotide sugar epimerase dehydratase protein
Organism
sfh
Sinorhizobium fredii HH103
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Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
CoA_binding_3
NAD_binding_4
adh_short
ThiF
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
CCF00416
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Position
pSfHH103e:1191743..1194004
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AA seq
753 aa
AA seq
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MQRFYDAAKAVRDSFLMLPRGEAARSSAKVLLAVCGAALDIGFRRLRGAVFSVQNYPALY
VADLGSAGIALAVALLLRYGFAELSTRPETASVLLWSGAQYIAICAIIFPLSGLYSRNWK
YGSISDLLIILRAVLVTSLLLISLLFFSTRLTDMPRTVVPMQSLLLIAFLAAARLSFRAE
EIPLARPVFKNGRHKGAGDDHQVPLLLVGAGDAAELYLRALARDPNATHVPVACLDKNAD
QLGMSLRGVPIAGRVEDFERVVAELEQINKRPRHVVFTEAPANFGETASDELLRSADRLG
IAVSRLSQLTELKLAKGDNPYELRSIELTDLLERPQAALDREAIARLVRGRRVLITGAGG
SIGSELTAQIAACEPAEIVLVDNSEYNLYAIDMTLTETFPKVSRWSYLCSVRRNQRVEEI
FDRHRPELVFHAAALKHVPMVQMNPREGVLTNVIGTMNVANAAKKYGTLAMVQVSTDKVV
NSTSVMGATKRLAELYCQALDLHGLETAKGPRFMTVRFGNVLGSSGSLIPLFKRQLARGG
PLTVTDPCMTRFFMTIREAVELTLQASAYGFEKQLGQGEIFVLDMGEPVKIIDIARRMIR
LAGFTPDQDIEIKIIGCRPGEKLYEELFDESDKRTTSPVPGVLGAVPEPIPLPTLRNAFA
RLQRDAERGNDSGVVAVMRELLPRYEHDADNTEPPAVKNKRGRLQPKSRSKAGAPRRQIY
QKSARSGLRNLPKERPRRASVAGLIEKWEARFA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtttttacgacgccgcgaaggcagtgcgcgatagtttcctaatgttgccgaga
ggggaagcagcaagatcatcggccaaagtgctgctggcggtatgcggtgcggccctcgac
atcggctttcggcgtctacgaggggccgttttcagcgttcagaactaccctgccctatac
gttgccgaccttggctccgcaggcattgcgctcgccgtggcgctgttgctgcgttacggc
tttgcagagctcagtaccaggcctgaaaccgcctctgtcctgttgtggtccggcgcgcag
tacatcgccatttgcgccatcattttccccttgtccggcctctatagccgaaactggaag
tatggctccatctccgatctcttgatcattcttcgcgcagtcctcgtgacatctctattg
ctcatctcgctcctgttcttttcgacaagactgaccgatatgccgcgaaccgtcgtcccg
atgcagtcgctccttctgatcgccttcctcgccgcggcgcggctgagctttcgcgccgag
gaaatccctctggcgcgacccgttttcaagaatgggcgccataagggggcgggcgacgac
caccaagtcccgctgctgctcgtcggagcgggcgacgccgccgagctttacctgcgcgca
ctcgcccgggacccgaacgccactcatgtgccagtggcctgcctcgataaaaatgcagac
cagctcgggatgagccttcgcggcgtgccgatcgcggggcgggtcgaggatttcgagcgg
gtggtggcggaactggagcaaatcaacaagcggccgcgtcacgtcgttttcacggaagct
ccggcgaacttcggcgaaaccgcgtccgacgaactgctgcggtccgccgacaggctcggc
attgcagtgtcgcgcctgtcgcagctgaccgagctcaagctcgccaaaggtgacaaccct
tacgaactgcggtcgatcgaactcaccgacctcctcgagcgtccgcaagcggcgctcgac
cgcgaggcgatcgcccgtctcgttcgcggccggcgcgtgctgatcaccggagccggcgga
tcgatcggcagcgagctgaccgcacaaatcgctgcgtgcgaaccggcggagatcgtgctg
gtcgacaattcggagtacaatctttacgcgattgacatgacgctcaccgagaccttcccg
aaggtatcccggtggagttacctttgcagcgtgcgccgcaaccagcgtgttgaggaaatt
tttgatcggcatcggcccgagctggtcttccatgcagcggcgctcaaacacgtgcccatg
gtgcagatgaacccgcgcgaaggcgtcctcacgaacgtcatcggcaccatgaacgttgcc
aatgcggcaaagaaatacggcacgcttgccatggtccaggtatcgaccgacaaggtcgtg
aactcgacaagcgtgatgggcgcgacgaagcgccttgcggagctctattgccaggcgctc
gacctgcacggtcttgaaaccgccaagggtccgcggttcatgaccgttcgcttcggcaac
gtgctgggttcaagcggatcgctgattccgctcttcaagcgtcagcttgcaagaggcggc
ccattgaccgtcaccgatccatgcatgacacgcttttttatgacgatccgtgaagccgtg
gagctaacgttgcaggcatcggcctacggtttcgaaaagcagctcggacagggagagatt
ttcgttctcgacatgggcgagccggtcaagatcatcgacattgcacgccggatgatccgg
ctggccggtttcaccccggaccaggacatcgagatcaagatcatcggttgccggccgggc
gaaaagctctacgaggaacttttcgacgagagcgacaagcgcactacgtcgccggtgccg
ggcgtcttgggcgcggttccggagcccattcccttgccgacattgcggaacgcgttcgct
cgcctgcagcgcgatgcggagcggggcaacgattcgggcgttgtggcggtcatgcgtgag
ctgcttccccgctatgagcacgatgccgacaacaccgaacctcccgccgtgaagaataaa
cggggccgcctccagccgaaaagccgcagcaaggctggggctccacggcggcaaatctac
caaaagagcgcccgcagcgggcttcgaaatctaccaaaggagcgcccgcggcgagcttcg
gttgccgggttaattgaaaaatgggaagcgcggttcgcctga
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