Streptomyces microflavus: SFUL_2908
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Entry
SFUL_2908 CDS
T02650
Name
(GenBank) secreted pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfi
Streptomyces microflavus
Pathway
sfi00040
Pentose and glucuronate interconversions
sfi01100
Metabolic pathways
sfi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SFUL_2908
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFUL_2908
Enzymes [BR:
sfi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SFUL_2908
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AGK77847
UniProt:
N0CXX2
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All DBs
Position
complement(3305054..3306397)
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AA seq
447 aa
AA seq
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MPARKRHTRAIAVTLGCASLALALSTPARATAHPRHPGPGVERAVLPAGDGWAAAEGSTT
GGANATPDHVYTVTDRAELIAAFAEAGDAPKIIRISGTVHGNSDADGTPIGCEEYRTGGY
TLEKYLAAYDPEVWGRDTVPSGPLEEARAASAKLQAAAVNIKVPSNTTLVGVGKNPKIIG
AGLQVRDVSNVIIRNIAFEDTYDCFPQWDPTDGAGGAWNAEYDNLVVYGSRHVWVDHNTF
SDGDRPDADQPHYFGQVYQQHDGLFDIVRGADLVTVSWNVLKDHDKTMLIGNSDGAGATD
RGKLRVTLHHNLFKDVKERAPRVRFGQVDSYNNHFVATRGSAYGYTYGIGAESRLVAEHN
AFTLTREVDRATILKKWSESSLTAENNYVNGRKTDLVAVHNAGVPAEHLTEGAGWTPGLR
TSVHHPLVVPVVVALKAGAGKASVTGH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcaagcgccacacccgcgccatcgcggtgaccctgggctgcgcctccctg
gccctcgccctcagcaccccggcccgggccaccgcccacccgcgccaccccggtccgggc
gtcgagcgcgccgtactgcccgccggggacggctgggccgccgccgagggctccaccacg
gggggcgcgaacgccacccccgaccacgtctacacggtgaccgaccgggccgaactcatc
gccgccttcgcggaggcgggcgacgcaccgaagatcatcaggatctccgggaccgtgcac
ggcaactccgacgccgacggcacgccgatcggctgcgaggagtaccggacgggcggctac
accctggagaagtacctcgccgcctacgaccccgaggtctggggccgggacacggtgccc
tcgggtccgctggaggaggcccgcgccgcctccgcgaagctgcaggcggccgccgtcaac
atcaaggtgccctccaacaccaccctggtcggcgtggggaagaacccgaagatcatcggc
gccgggctccaggtgagagacgtctccaacgtcatcatccgcaacatcgccttcgaggac
acctacgactgcttcccccagtgggaccccacggacggggccgggggcgcctggaacgcg
gagtacgacaacctcgtcgtgtacggctcccgccatgtctgggtcgaccacaacacgttc
agcgacggcgaccgccccgacgccgaccagccccactacttcggccaggtgtaccagcag
cacgacggcctcttcgacatcgtgcgcggcgccgacctggtcaccgtctcgtggaacgtc
ctcaaggaccacgacaagaccatgctcatcggcaacagcgacggcgccggggccaccgac
cggggcaagctccgcgtcacgctccaccacaacctcttcaaggacgtcaaggagcgggcc
ccgcgcgtgcggttcggccaggtcgactcgtacaacaaccacttcgtggcgaccaggggc
agcgcctacggatacacgtacggcatcggcgcggagtcccgactggtcgcggagcacaac
gcgttcaccctcacgcgggaggtcgaccgggcgacgatcctgaagaagtggtcggagtcc
tcgctcacggcggagaacaactacgtcaacgggcggaagaccgacctggtcgccgtgcac
aacgcgggtgtgccggccgagcacctcaccgagggcgcgggctggacgcccggcctgcgg
acgtcggtccaccacccgctcgtcgtgcccgtagttgtggcgctcaaggcgggagcgggc
aaggcgagcgtgaccggccactga
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