Streptomyces microflavus: SFUL_2975
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Entry
SFUL_2975 CDS
T02650
Name
(GenBank) UPF0027 domain containing protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sfi
Streptomyces microflavus
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfi03016
]
SFUL_2975
Enzymes [BR:
sfi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SFUL_2975
Transfer RNA biogenesis [BR:
sfi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SFUL_2975
Prokaryotic type
tRNA splicing ligases
SFUL_2975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AGK77914
UniProt:
N0CSK5
LinkDB
All DBs
Position
complement(3383509..3384702)
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AA seq
397 aa
AA seq
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MSYVEVPGAKVPIRMWTDPASVEDVAMQQLRNVSTLPWIKGLAVMPDVHFGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVRTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDGAVDPG
KLHGFPTSGWDDFWGRFDGIAEAVKFRQERATKQMGTLGSGNHMIEFCLDSGGGVWLMLH
SGSRNIGKELAEHHIGIAQKLPHNQGLVDRDLAVFISDTPQMTAYRNDLYWAQEYAKYNR
AIMMALFKDVVRKEFKKAKPVFEQEISCHHNYVAEERYDGADLLVTRKGAIRAGSGEYGI
IPGSMGTSSYIVKGLGNEKAFNSASHGAGRRMSRNAAKRRFTVRDLEDQTRGVECRKDSG
VLDEIPAAYKPIEQVMEQQRDLVEVVAKLKQVVCIKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtagaggtgccgggggcgaaggtccccatccggatgtggaccgatccggcg
tcggtcgaggacgtcgccatgcagcagctgcgaaacgtgtccacgctgccgtggatcaag
ggtctcgccgtcatgccggacgtccacttcggcaagggggccacggtcggttcggtgatc
gcgatgcagggtgcggtctgcccggccgcggtgggggtcgacatcggctgcgggatgtcc
gcggtcaggacgtccctgaccgcaaacgatcttcccggcgacctgtcacggctgcgctcc
aagatcgaacaggccattccggtgggccgcgggatgcacgacggcgccgtcgacccgggg
aagctgcacgggttcccgacgtccgggtgggacgacttctgggggcggttcgacgggatc
gcggaagcggtcaagttccgtcaggaacgtgccacgaagcagatgggaacgctcggatcg
ggaaaccacatgatcgagttctgtctcgacagtggcgggggcgtgtggctgatgctgcac
tccggctcccggaacatcggcaaggagctggccgagcaccacatcgggatcgcgcagaag
ctgccgcacaaccagggtctggtcgaccgggacctggcggtcttcatctcggacaccccg
cagatgaccgcataccggaacgacctgtactgggcgcaggagtacgccaagtacaaccgc
gcgatcatgatggcgctcttcaaggacgtggtccgcaaggagttcaagaaggcgaagccg
gtcttcgagcaggagatctcctgccaccacaactacgtggcggaggagcggtacgacgga
gcggacctgctggtcacccgcaagggagcgatccgagccggctccggtgagtacgggatc
atccccggctcgatgggcaccagttcgtacatcgtgaagggcctcggcaacgagaaggcg
ttcaactcggcctcccacggagccggtcgccggatgagccggaacgcggccaagcgccgc
ttcacggtgcgggatctggaggaccagacacggggcgtggagtgccgcaaggactccggt
gtcctggacgagatcccggccgcgtacaagcccatcgagcaggtcatggagcagcagcgg
gacctggtcgaggtcgtcgcgaagctcaagcaggtcgtctgcatcaagggctga
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