Streptomyces microflavus: SFUL_397
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Entry
SFUL_397 CDS
T02650
Name
(GenBank) Transcription termination factor Rho 2
KO
K03628
transcription termination factor Rho
Organism
sfi
Streptomyces microflavus
Pathway
sfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFUL_397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfi03021
]
SFUL_397
03019 Messenger RNA biogenesis [BR:
sfi03019
]
SFUL_397
Transcription machinery [BR:
sfi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SFUL_397
Messenger RNA biogenesis [BR:
sfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SFUL_397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
ATPase_2
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
AGK75381
UniProt:
N0CGW7
LinkDB
All DBs
Position
460113..461252
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AA seq
379 aa
AA seq
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MTTTLERPVLREPRPVRAAGLLDTAPGGHGLLRVRGGHPSPDDIKVSPALMRRYGLRKGD
AVEGSCERPRVLDTVDRVNGLAPQTSGGRAHFHDLTPVHPTQRLRLETPKGGPALRIVDL
VSPVGKGQRGLLVAPPRTGKTVLLQQLAAAVATNHPECHLMVVLLDERPEEVTDMRRSVR
GEVYASTFDRPAKEHIALADLAVERAKRLVEQGRDVVVLLDSLTRLCRAHNNAAGSGGRT
LSGGVDAAALAGPKKLFGAARSAEEGGSLTILATALVETGSRADEFFFEELKGTGNMELR
LDRSLADRRVFPAVDIARSGTRREELLTGPVELSTVRALRRALHARDGHGALEALLDKVR
RTPDNATFLRQVQPTVPGA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacactcgaacgccccgtactccgtgagccgcgccccgtccgggccgcaggt
ctcctggacaccgcccccggcggccacggcctgctccgtgtccggggcggccacccctcc
cccgacgacatcaaggtctctcccgcgctgatgcgccggtacggcctgcgcaagggcgac
gccgtcgaggggagctgcgagcggccccgcgtcctcgacaccgtcgaccgggtcaacggc
ctcgcaccgcagacttcgggcggccgcgcccacttccacgacctcaccccggtccacccc
acccagcggctgcggctggagaccccgaagggcggtccggcgctccggatcgtcgatctg
gtctcccccgtcggcaagggccagcgcggcctgctcgtcgcaccgcccaggaccggaaag
acggtcctgcttcagcagctcgccgccgccgtcgccaccaaccaccccgagtgccatctg
atggtggtcctcctggacgaacgccccgaggaggtcaccgacatgcggcgctccgtgcgc
ggcgaggtgtacgcctccaccttcgaccggcccgccaaggagcacatcgccctcgccgac
ctggccgtggagcgcgccaagcgcctcgtcgagcagggccgcgacgtggtggtcctgctg
gactccctcacccggctgtgccgcgcccacaacaacgcggccggatcgggcggccgcacc
ctgagcggcggcgtcgacgcggcggccctggccggccccaagaagctgttcggggccgcg
cggtccgccgaggagggcggctcgctcaccatcctggcgaccgcgctggtggagacgggc
tcccgcgccgacgagttcttcttcgaggagctgaaggggaccggcaacatggagctgcgc
ctggaccgctcgctggcggaccggcgggtcttccccgccgtcgacatcgcccgctccggc
acccgccgtgaggagctgctgacgggccccgtcgagctctccaccgtacgggcgctgcgc
cgcgccctgcacgcccgggacggtcatggcgccctggaggcgctgctggacaaggtccgg
cgcaccccggacaacgcgacgttcctccgtcaggtgcagcccaccgtgccgggcgcctag
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