Streptomyces microflavus: SFUL_4383
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Entry
SFUL_4383 CDS
T02650
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sfi
Streptomyces microflavus
Pathway
sfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFUL_4383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfi03019
]
SFUL_4383
03400 DNA repair and recombination proteins [BR:
sfi03400
]
SFUL_4383
Enzymes [BR:
sfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFUL_4383
Messenger RNA biogenesis [BR:
sfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SFUL_4383
DNA repair and recombination proteins [BR:
sfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SFUL_4383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AGK79283
UniProt:
N0D0C5
LinkDB
All DBs
Position
4859173..4861236
Genome browser
AA seq
687 aa
AA seq
DB search
MGVTMDVTGTVTGNGTDTDNGSETEAQRTLHRVFGYDAFRGEQGEVIEHVVAGGDAVVLM
PTGGGKSLCYQIPSLVRRGTGVVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRSM
EAQFLAGELDLLYLAPERLRLDSTLSLLARGEISVFAIDEAHCVAQWGHDFRPDYLALSV
LGERWPDVPRIALTATATGATHEEITRRLGMPDAKHFVASFDRPNIQYRIVPKSDPKKQL
LTFLQEEHAGDAGIVYCLSRASTEKIAEYLTRNGVNAVPYHAGLDASTRATHQARFLREE
GLVVVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGDPSTAWMAYGLQDVV
QQRKLIQGGEGDDAHRRRAAAHLDSMLALCETVQCRRAQLLTYFGQEPTAANCGNCDTCL
VPPETWDGTVVSQKLLSTVVRLKRERNQKFGAGQIIDILLGRKTAKVIQFDHDQLSVFGI
GEELAEAEWRGVVRQLLAQGLLAVEGEYGTLVLTEESATVLGREREVLLRKEPKKPTSRS
SSSAGGSKGAKGKAAAADLPASAVPVFEALRTWRGATAKEQGVPAYVIFHDATLREIATL
HPSSLAELGGISGLGEKKLATYGEGVLEVLAETVPGAASEAPAAEAPAPRPAPTPARTKA
PAAPVAPAAQPAGDPEFAWDEEPPEYE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgtgaccatggatgtgaccgggacggtgaccggcaacgggaccgacaccgacaac
ggttccgagaccgaggcgcagcggacgctgcaccgggtcttcggatacgacgcgttccgc
ggtgagcagggcgaggtcatcgagcatgtggtcgccggcggcgacgccgtcgtgctcatg
ccgaccggcggcggaaagtccctctgctaccagatcccgtccctggtcaggcgcggtacc
ggggtcgtcgtctcgccgctgatcgccctgatgcaggaccaggtcgacgccctgcgggcg
ctcggtgtgcgggccggcttcatgaactccacgcaggacttcgacgagcgccgctcgatg
gaggcgcagttcctcgcgggcgagctggacctgctctacctggcgccggagcggctgcgg
ctggactccacgctctcgctgctggcccggggcgagatctccgtcttcgcgatcgacgag
gcgcactgcgtcgcccagtggggccacgacttccgccccgactatctggcgctgtcggtg
ctcggcgagcgctggcccgacgtcccgcgcatcgcgctgacggcgaccgccacgggcgcc
acgcacgaggagatcacccgccgcctcggcatgccggacgcgaagcacttcgtcgccagc
ttcgaccggcccaacatccagtaccggatcgtcccgaagtccgacccgaagaagcagctc
ctcaccttcctccaggaggagcacgccggggacgcgggcatcgtctactgcctctcgcgc
gcctccacggagaagatcgcggagtatctgacccgcaacggcgtcaacgccgtgccgtac
cacgcgggcctggacgcctcgacgcgcgccacccaccaggcgcgcttcctccgggaggag
ggcctcgtcgtcgtcgcgaccatcgccttcggcatgggcatcgacaagccggacgtccgg
ttcgtcgcccacctggacctcccgaagtccgtcgaggggtactaccaggagaccggccgc
gcgggccgtgacggtgatccgtcgacggcctggatggcgtacgggctccaggacgtcgtc
cagcagcgcaagctcatccagggcggcgagggcgacgatgcccaccgccgccgtgccgct
gcccacctggactcgatgctggcgctctgcgagacggtccagtgccgccgggcccagctc
ctcacctacttcggccaggagcccaccgccgcgaactgcggcaactgcgacacctgcctg
gtcccgccggagacctgggacggcacggtcgtctcgcagaagctgctctccacggtggtc
cgcctcaagcgcgagcggaaccagaagttcggcgcgggccagatcatcgacatcctgctg
ggccgcaagaccgccaaggtcatccagttcgaccacgaccagctctccgtcttcggcatc
ggggaggagctggccgaggcggagtggcgcggcgtcgtgcgccagctgctggcccagggc
ctgctcgcggtggagggggagtacggcacgctggtcctcaccgaggagagcgccacggtc
ctcggccgggagcgggaggtcctgctccgcaaggagccgaagaagcccacgtcccgctcg
tcgtcctcggccggcggctccaagggcgccaagggcaaggcggccgcggccgacctcccc
gcctccgcggtcccggtcttcgaggcgctgcgcacctggcgcggcgcgacggccaaggag
cagggcgtcccggcgtacgtgatcttccacgacgcgacgctgcgggagatcgcgaccctg
cacccgtcctcgctcgcggagctggggggcatcagcggcctgggcgagaagaagctggcg
acgtacggggagggcgtgctggaggtcctggcggagacggttccgggggcggcttcggag
gctcccgcagccgaagctcccgcaccccgcccggcaccgaccccggcccgtacgaaggcc
cccgcagccccggtggcccccgccgcccagccggccggtgaccccgagttcgcctgggac
gaggaaccgcccgagtacgagtga
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