Streptomyces microflavus: SFUL_4995
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Entry
SFUL_4995 CDS
T02650
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfi
Streptomyces microflavus
Pathway
sfi03420
Nucleotide excision repair
sfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SFUL_4995
03430 Mismatch repair
SFUL_4995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfi03400
]
SFUL_4995
Enzymes [BR:
sfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFUL_4995
DNA repair and recombination proteins [BR:
sfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFUL_4995
MMR (mismatch excision repair)
Other MMR factors
SFUL_4995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGK79891
UniProt:
N0CUS5
LinkDB
All DBs
Position
5524332..5527796
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AA seq
1154 aa
AA seq
DB search
MSSRITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVAAGVTDPEAIDPDNPPGEPTISTYHAFAGRLL
TEHGLRIGLEPSTRLLADATRYQLAAKVLREAPGPYPALTRSFPTLVSDLLALDGELSEH
LVRPGALDTYDTELLRELATARLSNADLRKIPETAEARRSLLGLTERYRTAKRSRDLLDF
GDQIALSAELALTRPEVGAILRDEFRVVLLDEYQDTSVAQRLLLSALFGSGTSATATGHA
VTAVGDPCQAIYGWRGASVANLDDFPEHFPHADGTPATRYSLSENRRSGGRLLHLANGLA
EPLRAMHEGVEALRPAPGAERDGMVRCALLSTHTEEIDWLADSLAHLVRTGTPPGEIAVL
CRTAGDFPQIQAALVARDIPVEVVGLAGLLHLPEVADLVAVCEVLQDPGANASLVRLLTG
PRWRIGPRDLALLGRRARLLVHRAAHGDDADPDRRLAEAVEGTDPAEVISLADALDTFLI
AGDTADDGLPFSAEARIRFARLARELRDLRRSLADPLMDVLHRVLATTGLEVELSASPQA
LAARRRETLANFLDTAARFASLDGEASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLT
AHKSKGLEWDVVAVPGLVTGQFPSDRARDAWTAQAKVLPHALRGDAATLPELDTFDAKGM
KAFKEEMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKTRGPSAFLEALYEHCAA
GHGEIEAWADEPAEDEENPALAAPETDLAWPLPLDATALARRRAARDTVLAHLESLALHG
DEQAPAYAPEPDDVPLDEAPPDEAPFDEDWDWDALPTERPPEAPPHAEAAPDTPPHTPAA
PDELPHIPAARHPEETGPAQRLTPEETRTLASWDRDLDALAGELRRARATVHDVLVPASL
SATQLLHLAEDPDAFAKELARPMPRPPQPAARRGTRFHAWVESRYEELPLPMLGPDELPG
GDESDAEIADERDLAELKEAFERTAYARRTPYRVETPFQITLAGRVIRGRIDAVYRTGDT
YEIVDWKTTRHRTADPLQLAVYRLAWAELHDLPLDAVTATFLYVRSGETVHPQGLPGRAE
LERILLDEPAPQDG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcacgcatcaccgatcccgagcagctcaaggagctcctggggatccccttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcggggaagaccacggtgatggccgcacgcgtggtctggctcgtcggcaccggccag
gtcgcccccgagcaggtcctcggcctcaccttcaccaacaaggcggcgggcgagctggcc
gagcgcgtccgcaaggcgctggtcgccgccggggtcaccgaccccgaggccatcgacccg
gacaacccgccgggcgagcccacgatctcgacgtaccacgccttcgccggccgcctcctc
accgagcacggcctccgcatcggcctggagccgtccacccgcctcctcgccgacgccacc
cgctaccagctcgcggcaaaggtgctgcgtgaggcgcccggcccgtatccggcgctcacc
cgctccttccccaccctggtcagcgacctcctggcgctcgacggggagctgtccgaacac
ctcgtacggcccggggcgctggacacgtacgacaccgagctgctgcgggagctggccacc
gccaggctcagcaacgccgacctgcgcaagatccccgagaccgccgaggcccgccgctcc
ctcctcggcctcaccgagcggtaccggaccgccaagcggagccgggacctcctggacttc
ggcgaccagatcgccctctccgccgagctggccctgacccggcccgaggtcggggcgatc
ctgcgcgacgagttccgggtcgtgctgctcgacgagtaccaggacacgtcggtggcccag
cgcctgctgctgtcggcgctgttcggcagcggtacgtccgccacggccaccggccacgcg
gtgaccgccgtcggcgacccctgccaggcgatctacggctggcgcggtgcctccgtcgcc
aacctcgacgacttccccgagcacttcccgcacgccgacggcacccccgccacccgctac
agcctcagcgagaaccggcgcagcggcggccgcctcctccacctcgccaacggcctcgcg
gagccgctgcgcgcgatgcacgagggcgtcgaggcgctgcgccccgcaccgggggccgag
cgcgacgggatggtccggtgcgccctgctgtccacccacaccgaggagatcgactggctc
gcggactccctcgcccacctcgtccgcaccggcaccccgcccggtgagatcgccgtcctg
tgccgcaccgccggggacttcccgcagatccaggcggccctggtcgcccgggacatcccg
gtcgaggtggtcggcctggccgggctgctgcacctgcccgaggtggcggacctggtcgcc
gtctgcgaggtcctccaggacccgggtgccaacgcctccctggtccgcctcctcaccgga
ccgcgctggcgcatcggcccccgtgacctcgcgctcctgggccgccgcgcccgcctcctc
gtccaccgggccgcccacggggacgacgccgacccggaccggcggctcgcggaggccgtc
gagggcaccgacccggccgaggtgatatcgctcgcggacgccctggacaccttcctgatc
gcgggggacacggcggacgacgggctgccgttctcggcggaggcccgcatccgcttcgcc
cgcctcgcccgcgagctgcgcgacctgcgccgctcgctggccgatcccctgatggacgtc
ctgcaccgcgtgttggccaccacgggcctggaggtcgagctgtcggcgtccccgcaggcg
ctggccgcccgccgccgcgagaccctcgccaacttcctggacacagcggcccgtttcgcc
tccctggacggcgaggcgtcgctcctcgccttcctcggcttcctgcggaccgccgcgcag
tacgagaaggggctcgacaacgcgctgcccggcggcgagaacaccgtcaaggtcctcacc
gcgcacaagtccaaggggctggagtgggacgtggtcgccgtgccaggactggtcaccggc
cagttccccagcgaccgggcccgggacgcctggaccgcccaggccaaggtgctcccgcac
gccctgcgcggcgacgcggcgacgctcccggagctggacacgttcgacgccaagggcatg
aaggcgttcaaggaggagatgaaggagcaccagcacacggaggaactgcgcctgggctac
gtcaccttcacccgcccccgctccctgctcctcggctccggccactggtggggcccgtcc
cagaagaagacacgcggcccgtcggccttcctggaggcgctgtacgagcactgcgcggcg
ggccacggcgagatcgaggcgtgggcggacgagcccgccgaggacgaggagaacccggcc
ctcgcggcgcccgaaaccgacctggcctggccgctcccgctcgacgccacggccctcgcc
cgccgccgcgccgcccgggacacggtcctggcccacctggagagcctcgccctccacggg
gacgagcaggcaccggcgtacgcccccgaacccgacgacgtacctctcgatgaggcaccg
ccggacgaggcaccgttcgacgaggactgggactgggacgcgctccccaccgaacgcccc
ccggaggcacccccgcacgccgaggccgccccggatacgcccccgcacaccccggccgcc
ccggacgagctcccgcacattcccgccgcccgccaccccgaggagaccggccccgcgcaa
cggctcacccccgaggagacccgcaccctcgcctcctgggaccgggacctcgacgccctg
gccggggagctgcgccgtgcccgcgccaccgtgcacgacgtcctcgtccccgcctcgctc
tccgccacccagctgctccacctggccgaggaccccgacgccttcgccaaggagctggcc
cggccgatgccccggccgccgcagcccgccgcccgccggggcacccggttccacgcctgg
gtggagtcccggtacgaggagctgccgctgcccatgctcggccccgacgagctgcccggg
ggcgacgagagcgacgcggagatcgccgacgagcgggatctcgctgagctgaaggaggcg
ttcgagcgcaccgcgtacgcccggcgcacgccgtaccgggtggagaccccgttccagatc
accctcgcgggccgggtgatccggggccgtatcgacgccgtgtaccgcacgggtgacacc
tacgagatcgtcgactggaagaccacccgccaccgcaccgccgacccgctccagctcgcc
gtctaccggctggcctgggccgagctgcacgatctgccgctcgacgccgtcaccgccacc
ttcctctacgtacgcagcggggagaccgtccacccgcagggtctgccgggccgggcggag
ctggagcggatcctgctggacgagcccgccccgcaggacggatag
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