Streptomyces microflavus: SFUL_5154
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Entry
SFUL_5154 CDS
T02650
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sfi
Streptomyces microflavus
Pathway
sfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFUL_5154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfi03021
]
SFUL_5154
03019 Messenger RNA biogenesis [BR:
sfi03019
]
SFUL_5154
Transcription machinery [BR:
sfi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SFUL_5154
Messenger RNA biogenesis [BR:
sfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SFUL_5154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGK80047
UniProt:
N0D487
LinkDB
All DBs
Position
5697210..5699264
Genome browser
AA seq
684 aa
AA seq
DB search
MSDTTDLMGVTADKNVDSAAPAEGAATGTTARRRRSGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGGSAAPKASSKAGTGDDAPAAEAESKPKRRATSKARTGDEAA
AEKAAAQQQIDIPGQPASDDQPTGERRRRRATAQAGSPDTKAEAKTEVKAEPQAEQKTED
RGEPKGDAKAEAAADTAEGRRGDRQGRGERGDRGERGERRERQRDRRGKGDDQGQQGGGG
QRPQRQGQGQSQGQGQGQSQQNRDNGPQDDFDDEAGGRRGRRGRYRDRRGRRGREDFASD
VQVADDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVR
QPKDGERREKFNALVRLDSVNGMAPESGRGRPEFQKLTPLYPQDRLRLETDSNILTTRII
DLVAPIGKGQRGLIVAPPKTGKTMILQAIANAITVNSPECHLMVVLVDERPEEVTDMQRS
VKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASG
RILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVETGSRMDEVIFEEFKGTGNME
LKLDRKLSDKRIFPAVDVDASSTRKEEILLGTDELAVVWKLRRVLHALDQQQAIELLLDR
MKKTQSNAEFLLQIQKTTPGNGND
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgtcactgccgacaagaacgtcgacagcgccgcg
cccgccgaaggtgctgccactggcaccaccgcacggcgccgccgctccggcaccggcctc
gagggcatggtcctggccgagctgcagcaggtcgcgtccggcctcggcatcaggggtacc
gcgcggatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggcgggcggcgga
tccgccgcccccaaggcctcctccaaggctggtaccggggacgacgcccccgccgccgag
gcggagagcaagcccaagcggcgtgccacctccaaggcgcgcaccggggacgaggccgcc
gccgagaaggccgcggcccagcagcagatcgacatccccggtcagccggccagcgacgac
cagcccacgggcgagcgccgtcgccgtcgcgcgaccgctcaggcgggcagccccgacacc
aaggccgaggcgaagaccgaggtcaaggcggagccgcaggccgagcagaagaccgaggac
cgcggcgagcccaagggcgacgccaaggccgaggccgccgccgacaccgccgagggccgt
cgtggtgaccgccagggccgcggcgagcgcggtgaccggggcgagcgcggggagcgccgc
gagcgccagcgcgaccgccggggcaagggcgacgaccagggccagcagggcggcggcggg
cagcgcccgcagcgccagggccaggggcagagccagggtcaggggcagggccagagccag
cagaaccgtgacaacggtccgcaggacgacttcgacgacgaggcgggcggccgccgcggc
cgtcgtggccgctaccgcgaccgccgtggccgccgtggccgcgaggacttcgccagcgat
gtgcaggtggccgacgacgacgtcctgatccccgtcgcgggcatcctggacatcctcgac
aactacgcgttcatccggacctccggctacctgccgggcccgaacgacgtgtacgtctcg
ctcgcccaggtccgcaagaacggcctgcgcaagggtgaccacgtcaccggcgcggtgcgg
cagcccaaggacggcgagcggcgcgagaagttcaacgcgctcgtccgcctcgactcggtc
aacggcatggcccccgagtccggccggggccgccccgagttccagaagctgaccccgctg
tacccgcaggaccggctccgcctggagaccgactccaacatcctgacgacgcggatcatc
gacctggtggccccgatcggcaagggtcagcgcgggctcatcgtggccccgccgaagacc
ggtaagaccatgatcctgcaggccatcgccaacgcgatcacggtcaacagccccgagtgc
cacctgatggtcgtcctggtcgacgagcgtccggaagaggtcaccgacatgcagcggtcg
gtgaagggcgaggtcatctcctcgaccttcgaccgtcccgccgaggaccacaccaccgtc
gccgagctggccatcgagcgcgccaagcgtctcgtggagctgggtcacgacgtggtcgtc
ctgctcgactcgatcacccgtctgggccgcgcgtacaacctcgcggcgcccgcctccggc
cgcatcctctccggtggtgtcgactcgaccgcgctgtaccccccgaagcgcttcttcggt
gccgcgcgcaacatcgaggacggcggctcgctgaccatcctggcgaccgcgctcgtcgag
accggctcgcgcatggacgaggtgatcttcgaggagttcaagggcaccggcaacatggag
ctcaagctcgaccggaagctctcggacaagcgcatcttcccggcggtggacgtcgacgcg
tcctccacccgtaaggaagagatcctgctcggcaccgacgagctggcggtcgtctggaag
ctgcgccgggtgctgcacgcgctcgaccagcagcaggcgatcgagctcctcctggaccgg
atgaagaagacccagtccaacgcggagttcctgctccagatccagaagacgacgccgggc
aacggcaacgactga
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integrated database retrieval system
