Streptomyces microflavus: SFUL_5654
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Entry
SFUL_5654 CDS
T02650
Name
(GenBank) PNP Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sfi
Streptomyces microflavus
Pathway
sfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFUL_5654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfi03019
]
SFUL_5654
03016 Transfer RNA biogenesis [BR:
sfi03016
]
SFUL_5654
Enzymes [BR:
sfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SFUL_5654
Messenger RNA biogenesis [BR:
sfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SFUL_5654
Transfer RNA biogenesis [BR:
sfi03016
]
Prokaryotic type
tRNA degradation factors
SFUL_5654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AGK80541
UniProt:
N0CWP9
LinkDB
All DBs
Position
6244043..6246271
Genome browser
AA seq
742 aa
AA seq
DB search
MEKSLVENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASK
RPKENLDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLR
NEIQIVETIMALNPDHLYDVVAINAASCSTILAGLPFSGPIGATRVALIKGQWVAFPTHT
ELEDAVFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVADGAEAPTEEIVAAGLDASKPF
IKALCKAQSDLASKAAKPVGEFPVFLDYQDDVFEALAKAVTSELTQALTIAGKQDREAEL
DRVKEIAAEKLLPAFEGREKEISAAYRSLTKHLVRERVIKDKVRIDGRGVTDIRTLAAEV
EAIPRVHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETG
RVGSPKRREIGHGALAERAIVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLL
NAGVPLKAAVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQL
DTKLDGIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEV
IGPKGKMINQIQEDTGADITIEDDGTIYIGAQQGSQAEAARATINAIANPTMPEVGERYL
GTVVKTTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSR
GKLSLIPVIEGEEDETKDDTDK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcactagtggagaacgagacccactacgccgaggccgttatcgacaacgga
accttcggcacccgcaccatccgcttcgagacgggccgcctggccaagcaggccgccggc
tccgccgtcgcgtacctggacgacgacaccatggtgctgtcggccaccaccgcttccaag
cggcccaaggagaacctcgacttcttccccctcacggtggacgtcgaggagcggcagtac
gcggccggcaagatccccggctccttcttccgccgtgagggccggccctccgaggacgcg
atcctcacctgccgcctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgc
aacgagatccagatcgtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtg
gtcgcgatcaacgcagcctcctgctccaccatcctggcgggcctgcccttctccggcccg
atcggcgccacccgcgtcgccctgatcaagggccagtgggtcgcgttcccgacgcacacc
gagctcgaggacgccgtcttcgacatggtcgtcgccggtcgcgtcctggaggacggcgac
gtcgcgatcatgatggtcgaggccgaggccaccgagaagaccatccagctcgtcgcggac
ggcgccgaggctcccaccgaggagatcgtcgccgccggtctggacgcctcgaagcccttc
atcaaggcgctctgcaaggcccagtccgacctcgcctccaaggccgccaagccggtcggc
gagttcccggtcttcctggactaccaggacgacgtcttcgaggcgctcgccaaggccgtc
acctccgagctgacgcaggcgctcaccatcgccggcaagcaggaccgcgaggccgagctg
gaccgcgtcaaggagatcgccgcagagaagctcctcccggccttcgaaggccgcgagaag
gagatctccgccgcgtaccgctcgctgaccaagcacctggtccgcgagcgcgtcatcaag
gacaaggtccgcatcgacggccgcggcgtcacggacatccgtacgctggccgccgaggtc
gaggccatcccgcgcgtgcacggctcggcgctcttcgagcgtggcgagacccagatcctg
ggcgtcaccaccctcaacatgctccgtatggagcagcagctggacaccctttccccggtg
acccgcaagcgctacatgcacaactacaacttcccgccgtactccgtcggcgagaccggc
cgcgtgggctcgcccaagcgccgcgagatcggccacggagcgctcgccgagcgcgccatc
gtgccggttctcccctcgcgcgaggagttcccctacgcgatccgccaggtctccgaggcg
ctgggctccaacggctcgacgtccatgggctcggtctgcgcctccacgatgtcgctgctg
aacgccggtgtgcccctcaaggccgccgtcgccggtatcgccatgggcctgatctcgcag
gagatcgacggcaagacccactacgtcgccctcaccgacatcctcggtgcggaggacgcc
ttcggcgacatggacttcaaggtcgccggtacgaagcagttcgtgaccgcgctccagctc
gacaccaagctcgacggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgt
gacgcgcgtctgcacatcctggacgtcatgaacgaggccatcgacgtcccggacgagatg
tccccgaacgccccgcggatcatcaccgtcaagatccccgtggacaagatcggtgaggtc
atcggccccaagggcaagatgatcaaccagatccaggaggacaccggcgccgacatcacg
atcgaggacgacggcaccatctacatcggtgcccagcagggttcgcaggccgaggccgcc
cgcgccacgatcaacgcgatcgccaacccgaccatgccggaggtcggcgagcgctacctg
ggtacggtcgtcaagacgaccaccttcggtgcgttcgtctcgctcatgccgggcaaggac
ggcctgctgcacatctcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtc
gaggacgtgctcggcgtcggcgccaaggtccaggtcgagatcgccgagatcgactcccgc
ggcaagctctccctcatccccgtcatcgagggtgaagaggacgagacgaaggacgacacc
gacaagtga
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