KEGG   Streptomyces microflavus: SFUL_5680
Entry
SFUL_5680         CDS       T02650                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sfi  Streptomyces microflavus
Brite
KEGG Orthology (KO) [BR:sfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfi03400]
    SFUL_5680
Enzymes [BR:sfi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SFUL_5680
    5.6.2.6  RNA 3'-5' helicase
     SFUL_5680
DNA repair and recombination proteins [BR:sfi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SFUL_5680
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII DUF6406 AAA_25
Other DBs
NCBI-ProteinID: AGK80563
UniProt: N0D3Y2
LinkDB
Position
complement(6280116..6284867)
AA seq 1583 aa
MAPGGVCGPLSVVGCTMGNMTGSALDAFSPATRSWFAGAFSAPTPAQEGAWRAIGEGSDV
LVVAPTGSGKTLAAFLASLDRLAAGPPPAEAKKRCRVLYVSPLKALAVDVERNLRSPLTG
IRQESVRLGLPEPEVRVGIRSGDTPPAERRSMVTRPPDILITTPESLFLMLTSSARDALA
GVETVILDEVHAVAGTKRGAHLALSLERLDELLPRPARRIGLSATVRPVGEVARFLSPQR
KVEIVQPPSTKEFDLSVVVPVEDLGELGGSPATDGDAAQAEKPSIWPHVEERIADLVQSH
RSTIVFANSRRLAERLCNRLNEIAYERATGTAFDPDNPDSPALALPEAHTPAEVMAQSGA
ARGAPALLARAHHGSVSKEQRAQVEEDLKAGRLPAVVATSSLELGIDMGAVDLVIQVESP
PSVASGLQRVGRAGHQVGAVSTGVVFPKYRGDLVQAAVVTERMRTGAIEALRIPSNPLDV
LAQQLVAMVALDSWQADDLLALVRRAAPFASLPESAFTAVLDMLAGRYPSDAFAELRPRV
VWDRVGGTVTGRPGAQRLAVTSGGTIPDRGLFGVFLAGADPKKGGGRVGELDEEMVYESR
VGDVFTLGTTSWRIEDITRDRVLVSPAPGVPGRLPFWKGDQLGRPLELGRALGAFLREIG
GLSEENARLRLLAAGLDAWAADNILAYLDEQRRACGHVPDDRTILVERFRDELGDWRVVV
HSPFGAQVHAPWALALSARLGERYGMDAQVMHADDGIVLRLPDADMMGLDLLDFDAPPAP
DAADDGPAPGAFSYDSEQPPVGAADVVFDQGEVQQIVTDQVGGSALFAARFRECAARALL
LPRRSPGKRTPLWQQRQRASQLLQVASEFGSFPIVLEAVRECLQDVFDVPGLTELMGDLE
ARRVRLVEVTTQEPSPFARSLLFGYVAQFLYEGDSPLAERRAAALSLDSHLLAELLGQAE
LRELLDPEVLTELERELQWLSEDRRIKDIEGVADLLRVLGPLTDAELAERGAEPSWAPEL
ASSRRAIQVRIAGADHWAAIEDAGRLRDALGTALPVGVPEAFTEPVKDPLGDLLARFART
HGPFTAARAAERFGLGTAVTDGALQRLAASGRTVQGEFHPAGIGQEWCDATVLRRLRRRS
LAALRQELEPVEPAALASFLPQWQHFGSNRLRSIDGLARAVEQLQGAPVPASALEKLILP
SRVMGYTPAMLDELTTTGELIWAGAGALPGKDGWLSLYPADSAPLLLPAPHPLELSALHE
SLLTTLSGGYGLFFRQIADQVRATTHPDSTDQQLADALWELAWSGRLTNDTLAPLRSLLG
SGRTAGSTAHRARRSVPRGRYGSLTAAARPASRTGPPTVSGRWSLLPPREPEPTHRAHAL
ARTLLDRHGVVTRGAVQAEGVEGGFSATYRILAAFEDSGQARRGYVVEGLGAAQFAMDGA
VDRLRAAATARDRRDPGTAPQALVLAAADPANAYGAALPWPESPDGAGHKPGRKAGALVV
LVDGELTLYMERGGKSLLVWPSDPESPALLAAAEALAASARAGALGTVTVERTNGVSSLT
SPLGRTLEAAGFLATPRGLRLRA
NT seq 4752 nt   +upstreamnt  +downstreamnt
gtggccccgggcggtgtctgcggcccgttgtcagtggtggggtgcacgatggggaacatg
accggctccgctctcgacgccttctcgcccgcgacccgcagctggttcgccggtgccttc
agcgcgcccacccccgcgcaggaaggtgcctggcgtgccatcggcgagggcagtgacgtg
ctggtggtcgcgccgaccggttccggcaagacactggccgcgttcctcgcctcgctggac
cggctggcggccggtccgccgcccgcggaggcgaagaagcgctgccgtgtgctgtacgtg
tcccccctcaaggccctggcggtcgacgtcgagcggaatctgcgctccccgctgaccggc
atccgccaggagtcggtgcgtctgggcctgcccgagccggaggtgcgggtgggcatccgg
tccggtgacaccccgcccgccgagcggcgctccatggtgacccggccgccggacatcctg
atcaccacacccgagtcgctgttcctgatgctcacgtcctccgcccgggacgcgctcgcg
ggcgtcgagacggtgatcctcgacgaggtgcacgcggtcgccggtacgaagcgcggcgcc
catctcgccctgtccctggagcgcctggacgagctgctgccccggcccgcccgccggatc
gggctctccgcgacggtccggccggtcggggaggtcgcccgcttcctctcgccgcagcgc
aaggtggagatcgtccagccgccgtccaccaaggagttcgacctctcggtggtcgttccg
gtggaggacctgggcgagctgggcggttcgcccgccaccgacggggacgccgcccaggcg
gagaagccgtcgatctggccgcatgtcgaggagcgcatcgccgatctcgtccagtcgcac
cgctccacgatcgtcttcgccaactcacggcggctggcggagcgcctctgcaaccggctg
aacgagatcgcgtacgagcgggccaccggcaccgccttcgatccggacaatccggacagc
cctgctctcgccctgccggaggcgcacacccccgccgaggtcatggcccagtcgggcgcg
gcccggggcgccccggcactgctggcccgcgcccaccacggttcggtctccaaggagcag
cgggcccaggtggaggaggacctcaaggcggggcggctgcccgccgtggtggccacctcc
agcctggagctcggcatcgacatgggcgcggtcgacctggtgatccaggtcgagtccccg
ccctccgtcgcctccggtctccagcgggtgggccgggccgggcaccaggtgggcgcggtc
tccaccggagtggtcttcccgaagtaccgcggcgacctggtgcaggccgccgtcgtcacc
gagcggatgcggaccggggcgatcgaggcgctgcgcatcccgtccaacccgctggacgtc
ctcgcccagcagctggtcgccatggtggcgctggacagctggcaggccgacgacctgctg
gccctggtccgccgggccgccccgttcgcctcgctccccgagtcggcgttcaccgccgtg
ctcgacatgctcgccggacgctatccctccgacgccttcgcagagctgcggccccgggtg
gtgtgggaccgggtcggcggtacggtcacgggccgccccggagcgcagcgcctcgccgtc
acctcgggcggcaccattccggaccgcggcctcttcggggtcttcttggccggcgcggac
ccgaagaagggcggcggccgggtcggcgagctggacgaggagatggtctacgagtcccgg
gtcggtgacgtcttcacgctgggcacgacgtcctggcggatcgaggacatcacccgggac
cgggtcctcgtctcgcccgccccgggcgttccggggaggctgccgttctggaagggcgac
cagctgggccgccccctggagctcggccgcgccctgggggcgttcctccgcgagatcggc
gggctctccgaggagaacgcccggctccggctgctcgccgccgggctcgacgcctgggcg
gcggacaacatcctggcttatctggacgagcagcgacgggcctgcggccatgtcccggac
gaccggacgatcctggtcgagcggttccgggacgagctgggcgactggcgggtcgtcgtc
cactcccccttcggcgcccaggtgcacgccccctgggcgctcgccctctccgcccgcctc
ggtgagcggtacgggatggacgcccaggtcatgcacgccgacgacgggatcgtgctgcgg
ctccccgacgccgacatgatgggcctggacctcctcgacttcgacgccccgccggcaccg
gacgcggcggacgacggaccggcgccgggggccttctcgtacgacagcgagcagcccccg
gtcggtgccgccgatgtcgtcttcgaccagggcgaggtgcagcagatcgtcaccgaccag
gtcggtggctcggcgctgttcgccgcccgcttccgcgagtgcgccgcccgcgccctgctg
ctgccccggcgctcccccggcaagcgcaccccgctctggcagcagcgccagcgcgcctcc
cagctgctccaggtggcatccgagttcggttcgttcccgatcgtcctcgaagccgtccgc
gagtgcctccaggacgtcttcgacgtccccgggctcaccgaactgatgggtgacctggag
gcccgccgggtccggctggtcgaggtcaccacccaggagccctccccgttcgcccgctcc
ctcctcttcggttacgtcgcccagttcctgtacgagggcgactcgccgctggccgagcgg
cgggccgccgcactctccctggactcccacctcctggccgagctgctgggccaggcggag
ctgcgcgaactgctcgaccccgaggtcctcaccgagctggagcgggagctccagtggctc
agcgaggaccgcaggatcaaggacatcgaaggggtcgcggatctgctgcgcgtcctgggc
cccctcaccgacgccgagctggcggagcggggcgccgagccctcttgggcgccggagctg
gcgtcctcccgccgggccatccaggtccggatcgccggggccgaccactgggcggcgatc
gaggacgcgggcaggctgcgcgacgccctgggcacagcgctcccggtcggtgtgcccgag
gcgttcaccgagccggtgaaggatcccctcggcgatctcctcgcccgtttcgcccggacg
cacggcccgttcaccgccgcccgggccgccgagcggttcggcctcggcaccgccgtcacg
gacggcgcgctgcaacggctcgccgcctccggccggaccgtccagggcgagttccacccg
gcgggcatcggccaggagtggtgcgacgccacggtgctgcgccggctccgccgccgttcg
ctggccgcgctccgccaggagctggagccggtggagcccgccgcgctcgcctcgttcctc
cctcagtggcagcacttcggctccaaccgcctgcggtccatcgacgggctggcccgcgcc
gtcgaacagctccagggagcgcccgtccccgcatccgccctggagaagctgatcctgccg
agccgggtcatgggctacaccccggcgatgctcgacgagctgacgaccacgggcgagctg
atctgggcgggggccggagcgctgcccggcaaggacggctggctctccctctaccccgcc
gacagcgcacccctgctcctgcccgccccccacccgctggagctgtcggcgctccacgag
tcgctgctcaccaccctctccggggggtacggcctcttcttccggcagatcgccgaccag
gtccgggccaccacccacccggactccaccgaccagcagctcgccgacgccctctgggag
ctggcctggtccgggcggctcaccaacgacaccctcgccccgctgcgctcgctcctgggc
tccggacggacggcgggctccaccgcccatcgggccagacgcagtgtgccccgcggacgg
tacggatccctcaccgcggccgcccggcccgcctcccgcaccggccccccgacggtctcg
ggccgctggtccctgctgcccccgcgggagccggagcccacccaccgcgcccacgccctg
gcccgcaccctcctcgaccggcacggcgtggtcacccgcggcgcggtgcaggccgaaggg
gtggagggcggcttctcggcgacgtaccgcatcctggccgccttcgaggacagcggtcag
gcccggcggggctatgtggtcgaggggctgggggccgcccagttcgcgatggacggggcg
gtggaccggctgcgggcggccgccacggcccgcgaccgccgggacccgggcaccgcgccc
caggccctggtgctcgcggcggccgacccggccaacgcgtacggcgccgccctgccgtgg
ccggagtccccggacggcgcgggccacaagccgggccgcaaggcgggggcgctggtggtc
ctcgtcgacggcgagctcaccctctacatggagcgcggtggcaaatccctgctcgtctgg
ccgtccgaccccgagtcccccgcgctcctcgcggcggccgaggccctggccgcgtccgcc
cgcgccggtgcgctcggcaccgtgacggtggagcggaccaacggcgtctcctccctcacc
tcgccactgggccggaccctggaggcggccgggttcctggccacgccgagaggcctgcgt
ctgagggcgtga

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