Streptomyces microflavus: SFUL_6710
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Entry
SFUL_6710 CDS
T02650
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sfi
Streptomyces microflavus
Pathway
sfi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SFUL_6710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfi03400
]
SFUL_6710
Enzymes [BR:
sfi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SFUL_6710
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SFUL_6710
DNA repair and recombination proteins [BR:
sfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SFUL_6710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_8
DUF5795
Motif
Other DBs
NCBI-ProteinID:
AGK81588
UniProt:
N0D638
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All DBs
Position
7551205..7552065
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AA seq
286 aa
AA seq
DB search
MPELPEVEALRVFLDDHLAGKEIARVLPLAISVLKTYDPPLSALDGTTVTSVARHGKFLD
IEAGGLHLCTHLARAGWLRWKDSFPAAPPRPGKGPLALRLVTADGDGFDLTEMGTKKRLS
VHLVRDPMDVPGIARLGPDPLADTFDRDTFAGIVGGARRQIKGALRDQSLIAGIGNAYSD
EILHVAKMSPFKRTADLDEDDITRLYTALRTTLKDAVERTGGVEAGKLKSEKKSGMRVHG
RAGEACPVCGDTILEVSFSDSSLQYCPTCQTGGKPLADRRLSKFLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaagccctgcgggtcttcctcgacgaccacctggccggc
aaggagatcgcccgcgtcctcccgctggcgatcagcgtcctgaagacgtacgacccgccg
ctgagcgccctcgacgggaccaccgtcacctcggtggcccgccacggcaagttcctcgac
atcgaggcgggcgggctgcacctctgcacccacctggcccgggcgggctggctccgctgg
aaggactccttcccggccgccccgccgcgccccggcaagggcccgctcgccctgcgcctg
gtgaccgcggacggcgacggcttcgacctcaccgagatgggcaccaagaagcggctctcc
gtccacctcgtccgggacccgatggacgtccccggcatcgcccgcctcggccccgacccg
ctcgccgacaccttcgaccgggacacgttcgccggaatcgtcggcggggcgcgccgccag
atcaagggcgccctgcgcgaccagtcgctcatcgcgggcatcggcaacgcctacagcgac
gagatcctgcacgtggcgaagatgtccccgttcaaaaggaccgccgacctcgacgaggac
gacatcacccgcctgtacaccgcgctgcgcaccaccctcaaggacgccgtggaacggacc
ggcggagtggaggccggaaagctcaagtccgagaagaagagcgggatgcgcgtccacggc
cgggcgggggaggcctgcccggtctgcggtgacaccatcctggaggtctccttcagcgac
tcctcgctccagtactgccccacctgccagaccggcggcaaaccgctggccgaccggagg
ctgtccaagttcctgaagtga
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