Streptomyces ficellus: EIZ62_06685
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Entry
EIZ62_06685 CDS
T06929
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sfic
Streptomyces ficellus
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfic03016
]
EIZ62_06685
Enzymes [BR:
sfic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EIZ62_06685
Transfer RNA biogenesis [BR:
sfic03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EIZ62_06685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGV77974
UniProt:
A0A6I6F5E8
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All DBs
Position
1505141..1506436
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AA seq
431 aa
AA seq
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MTDAQETAAETALRTTGGGPPDDGVADGVVEETPIPLLEPREGIPPVVADEHALAEVIAA
FAGGTGPVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPDLSGLGEALAGAEWI
LHAATQDLPCLREIGMVPTRLFDTELAGRLAGFPRVGLGAMVESVLGFALEKGHSAVDWS
TRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKLDWAHQEFDAIASAPPPPPRKDPWR
RTSGMHKVRRRRQMAVVRELWTARDRIAQRRDVSPGKVLSDAAIVEAALALPANVHALTA
LPGFGHRMGRRQLEQWQAAVDRAKALPDAELPQPGQQVQGPPPPRAWADKDPAAAARLSA
ARAAVSALAEALNLPPENLITPDTVRRVCWEPPAEITAESVAGALAGYGARSWQVEQVTP
VLVGALSASKA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagagacagcactgcgaaccaccgggggcggccct
ccggacgacggcgtcgcagacggcgtggtcgaagagacgcccattcccctgctggagccc
cgtgaggggatcccgcccgtcgtggccgacgagcatgccctcgccgaggtgatcgccgcc
ttcgcgggcggcaccggccccgtcgccgtcgacgccgagcgcgcgtcgggctaccgctac
ggccagcgggcctacctggtgcagctgcgccgggagggcgcgggcagcgcgctgatcgac
ccggtcggctgccccgacctgtccggcctcggcgaggccctggccggcgcggagtggatc
ctgcacgccgcgacccaggacctgccgtgcctgcgcgaaataggcatggtgcccacccgc
ctgttcgacacggagctggccggccgcctcgccgggttcccccgggtcggcctcggcgcg
atggtcgagtcggtgctggggttcgccctggagaagggccactccgcggtggactggtcc
acccgcccgctgcccgagccctggctccggtacgccgcgctggacgtcgagctgctcgtc
gacctgcgtgacgcgctggagaaggagctggaccggcagggcaagctggactgggcgcac
caggagttcgacgccatcgcctccgccccgccgcccccgccccgcaaggacccctggcgc
cggacgtccggcatgcacaaggtgcgccggcgccgtcagatggcggtcgtccgggagctg
tggaccgcgcgcgaccggatcgcccagcggcgtgacgtgtcgcccggcaaggtcctcagc
gacgccgcgatcgtcgaggcggccctggcgctgccggccaatgtgcacgcgctgaccgcc
ctgcccgggttcgggcaccgcatggggcgccgccagctggagcagtggcaggcggcggtg
gaccgcgcgaaggcgctgcccgacgccgagctgccgcagcccggccagcaggtgcagggg
ccgcccccgccgcgcgcctgggcggacaaggacccggcggccgcggcgcggctgtccgcc
gcccgtgcggccgtgtccgcgctggccgaggcgctgaacctgccccccgagaacctgatc
acgccggacacggtgcgccgggtgtgctgggagccgcccgccgagatcaccgccgaatcg
gtggcgggcgcgctcgccgggtacggggcgcggtcctggcaggtcgagcaggtcacaccg
gtgctggtcggtgcgctgagcgcctcgaaggcgtaa
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