Streptomyces ficellus: EIZ62_12720
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Entry
EIZ62_12720 CDS
T06929
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfic
Streptomyces ficellus
Pathway
sfic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIZ62_12720 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfic03019
]
EIZ62_12720 (groL)
03110 Chaperones and folding catalysts [BR:
sfic03110
]
EIZ62_12720 (groL)
03029 Mitochondrial biogenesis [BR:
sfic03029
]
EIZ62_12720 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfic04147
]
EIZ62_12720 (groL)
Enzymes [BR:
sfic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EIZ62_12720 (groL)
Messenger RNA biogenesis [BR:
sfic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EIZ62_12720 (groL)
Chaperones and folding catalysts [BR:
sfic03110
]
Heat shock proteins
HSP60 / Chaperonin
EIZ62_12720 (groL)
Mitochondrial biogenesis [BR:
sfic03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EIZ62_12720 (groL)
Exosome [BR:
sfic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EIZ62_12720 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EIZ62_12720 (groL)
Exosomal proteins of breast cancer cells
EIZ62_12720 (groL)
Exosomal proteins of colorectal cancer cells
EIZ62_12720 (groL)
Exosomal proteins of bladder cancer cells
EIZ62_12720 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QGV79017
UniProt:
A0A6I6FDF3
LinkDB
All DBs
Position
complement(2925755..2927383)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDDLLATARPIDDKADIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILIHQGKISAITDLLPLLEKVIQ
AGSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDMAALTGATV
IAEEVGLKLDQAGLDVLGTARRVTVTKDDTTIVDGGGNSEDVQGRVAQIKSEIETTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLDGNLGKDGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVSELDKGQGFNA
ATGEYGDLIKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPADAGHGHGHGH
SH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtgaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcgccgaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtcctggcccaggccctcgtccgc
gagggtctgcgcaacgtcgccgccggcgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtctccgacgacctgctcgccacggcccgcccgatcgacgacaag
gccgacatcgccgccgtggccgcgctctccgcgcaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggcctggagctggacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtcaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatctccgcgatcaccgacctgctcccgctgctggagaaggtcatccag
gccggctcctccaagccgctcctgatcatcgccgaggacgtcgagggcgaggcgctgtcg
accctggtcgtcaacaagatccgcggcacgttcaacgccgtcgcggtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctcggtgacatggccgccctcaccggcgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctcggcacggcc
cgccgcgtcaccgtcaccaaggacgacaccacgatcgtcgacggcggcggcaactccgag
gacgtgcagggccgcgtcgcgcagatcaagtccgagatcgagaccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtgaaggtcctggacggcaacctcggcaaggacggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgcggtcgagccgctgcgctggatcgccgagaacgcgggcctg
gagggctacgtcatcacctccaaggtctccgagctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctgatcaaggccggcgtcatcgacccggtcaaggtcacc
cgctcggccctggagaacgccgcctccatcgcctccctgctgctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggagccggcggacgcgggccacggccacggtcacggccac
tcccactga
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