Streptomyces ficellus: EIZ62_16870
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Entry
EIZ62_16870 CDS
T06929
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sfic
Streptomyces ficellus
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfic03021
]
EIZ62_16870
Transcription machinery [BR:
sfic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EIZ62_16870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QGV79729
UniProt:
A0A6I6FLB7
LinkDB
All DBs
Position
complement(3764704..3765624)
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AA seq
306 aa
AA seq
DB search
MSAEQGSSKVLTLTPVPESVPVPESAPAPVPVPAQSGPATAPDTVSSASDAIDTRTLSRS
LFLRLAALDADGVEGPERTYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIK
AIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELAQKL
DRSPTVPELAAVLGVSEDDVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDTAL
EGVEYRESLKPLLAKLPPRERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLR
EGLISD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgctcacgcccgtgccggagtccgtg
cccgtgccggagtccgcaccggcacccgtgcccgtacccgcgcagagcggacccgcgaca
gctcctgacaccgtgtcgtcggcgtccgacgccatcgacacccgcactctgtcccgctcc
ctgttcctgcggctcgccgccctggacgccgacggcgtggaaggcccggagcgcacctac
gtccgtgacacgctcatcgagctgaacctgcccctcgtgcggtacgccgccgcccgcttc
cgctcccgcaacgagccgatggaggacatcgtccaggtcggcaccatcggcctgatcaag
gcgatcgaccggttcgactgcgaacggggcgtggagttcccgacgttcgccatgccgacg
gtcgtcggggagatcaagcggttcttccgcgacacctcgtggtcggtgcgggtgccgcgc
cggctccaggagctgcgcctggcgctgaccaaggcgagcgacgagctggcgcagaagctg
gaccgctcgccgaccgtacccgaactcgctgccgtgctcggcgtgtcggaggacgacgtg
gtcgacggcctcgcggtcggcaacgcgtacacggcctcctcgctcgactcgccctccccc
gaggacgacgggggcgagggctcgctggccgaccggctcgggtacgaggacaccgccctc
gagggcgtcgagtaccgggagtcgctcaagccgctcctcgccaaactcccgccccgcgag
cggcagatcatcatgctgcggttcttcgccaacatgacgcagtcccagatcggcgaggag
gtgggcatctcgcagatgcacgtctcccggctgctgacccgcacgctcgcgcagctgcgg
gaagggctcatctccgactga
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