Streptomyces ficellus: EIZ62_17340
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Entry
EIZ62_17340 CDS
T06929
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
sfic
Streptomyces ficellus
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QGV79800
UniProt:
A0A6I6F7W8
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Position
complement(3854120..3856156)
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AA seq
678 aa
AA seq
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MSGDGRDEPFGGAAADGSRSPADGSCEVPKVPKVPKVPKVPNQGRSGGSPARDGSPAPGG
GAAGAVVPAQRERDGAGSVLPPPVELPPSDADLVQRMRDGDDSAYEELFRRHSAAVRRYA
RTCCRDAHTADDLTAEVFARTLQAVRKGAGPEHAVRAYLLTTVRRVAAAWTRTSRREHLV
EDFAVFAAQAVRASAVPEAETLDVGADVRAMHEAEQSLAMRAFRSLPERWQAVLWHTTVE
EESPSEVAPLFGLTANATAVLASRAREGLKQAYLQAHVNRSLTAGGDCARYADRLGAYAR
GGLRMRAERGLRKHLEECARCRLAVGELEQVNAGIPALLPVAVIGWFAAGFSLKAAGLAA
GGAAGAAGAGAGAAAATGGSGGAGGGAAGGAAGGAAAEGLGAPAKAGVAVTVAVTAVAGV
VWALSGSPEPAPEAKRPPVAEPVVPPDPVAPPSPAAPAPPAPPAPEPVVEPLSPRPSAGP
ARPSPSATPAPPAPARPAPTPTPPPDPPIAPAPPAPPAPPAPKPTPTPPPPPPAVYQVNQ
LHYGLYGDHSAPEVRLGASSWMWQRWGMSIGGERYGHGVTVHARSSLTIDLNRRCSAYEA
FAGLDDMALGLGAVRFSVYGDGIRLWRSPVLRGGDAAVPVRVGIAGHRTLRLVVEPDPAA
PLGSVAPADWAESRIHCG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgacggtcgtgacgagccgttcggcggtgccgccgccgacggctcccgctct
ccggccgacggctcctgcgaggttccgaaggttccgaaggttccgaaggttccgaaggtt
ccgaaccagggccggtccggcggctccccggcgcgtgacggttccccggcgccgggcggt
ggtgcggccggtgccgtcgtgccggcgcagcgcgagcgggatggtgccgggtccgtgctc
ccgccgcccgtcgagctgcccccgtcggacgccgacctggtccagcgcatgcgggacggc
gacgactccgcgtacgaggagctgttccgcaggcactccgcggcggtgcggcgctacgcc
cggacgtgctgccgggacgcgcacaccgcggacgacctgacggcggaggtgttcgcccgg
acgctccaggcggtgcgcaaaggagcggggcccgagcacgccgtgcgcgcctacctcctg
acgaccgtgcgccgggtggccgccgcgtggacgaggacgtcccggcgggagcacctggtc
gaggacttcgcggtgttcgccgcgcaggcggtgcgcgcctcggccgtaccggaggccgag
acgctggacgtgggggcggacgtccgcgccatgcacgaggccgagcagtcgctcgccatg
cgggccttccgctcgctgcccgagcggtggcaggcggtgctgtggcacaccaccgtggag
gaggagtcaccgagcgaggtggcgcccctgttcgggctgaccgcgaacgccacggcggtg
ctcgccagccgggcccgcgaggggctgaagcaggcgtacctccaggcgcacgtgaaccgg
tcgctcaccgccgggggcgactgcgcgcgctacgcggaccggctgggcgcgtacgcccgg
ggcggtctgcggatgcgggccgagcgggggctgcgcaagcacctggaggagtgtgcccgg
tgccggctcgcggtgggcgagctggagcaggtcaacgccgggatcccggcactgctgccg
gtcgccgtgatcggctggttcgcggccgggttctcgctcaaggccgcgggcctcgcggcg
ggcggggcggctggtgcggcgggcgccggggcgggagcggcggctgcgacgggcggttcc
gggggtgcgggagggggtgccgccgggggtgccgccgggggtgccgccgccgaagggctg
ggtgcccccgcgaaggcgggcgtcgccgtgacggtggccgtcaccgcggtggcgggagtg
gtgtgggcgctgtccgggagtccggagcccgcccccgaggcgaagcgcccgcccgtggcc
gaacccgtcgtaccgccggaccccgtggcgcccccgagcccggccgcaccggcgccgccc
gcgcccccggcgccggaaccggtggtcgagccgctatcgccccggccgagcgcgggcccg
gcgcggccgtcaccgtcggccacacccgcaccgcccgcccccgcgcggcccgcgcccacg
cccacaccaccacccgacccgcccatcgcaccggcacctcccgcacctcccgcgcctccc
gcaccgaagccgacgccgacgccacccccgccaccgccggccgtgtaccaggtcaaccag
ctccactacggcctctacggtgaccactccgccccggaggtccggctcggcgcgtccagc
tggatgtggcagcgctgggggatgtccatcggcggcgagcggtacggacacggcgtgacc
gtgcacgcccggtcgtcgctgaccatcgacctcaaccgccgctgctccgcctacgaggcg
ttcgccggcctggacgacatggcgctgggcctcggcgcggtgcggttctcggtgtacggg
gacggcatccggctgtggcgctcgccggtgctgcgcggcggcgacgcggcggttccggtg
cgcgtcgggatcgcgggccaccggaccctccgcctggtcgtcgaaccggacccggccgcg
ccgctcggctccgtggcgcccgccgactgggccgagtcccgcatccactgcggttga
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