Streptomyces ficellus: EIZ62_18290
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Entry
EIZ62_18290 CDS
T06929
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sfic
Streptomyces ficellus
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfic03016
]
EIZ62_18290 (thpR)
Enzymes [BR:
sfic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EIZ62_18290 (thpR)
Transfer RNA biogenesis [BR:
sfic03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EIZ62_18290 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QGV79961
UniProt:
A0A6I6FA51
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All DBs
Position
4042457..4043029
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AA seq
190 aa
AA seq
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MRLFAAVLPSRVAVDELAAEVGLLQALTGAGDLRWTKRDGWHFTLAFMGEVDDRVVPELR
DRLARGAHRTAPFPLRLHGGGRFGRRVLWAGAAGGLDEMRLLAERADAAARRAGVPMDEH
RRYQAHLTVARSRDDAVDLRPFVERLREFDGSRWDVTELALVRSNLPRGGAAGEHPRYET
VGSWPLGGAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttcgctgccgtgctgccgagccgggtggccgtcgacgaactcgccgcggag
gtcggcctgttgcaggccctcacgggcgccggtgacctccgctggacgaagcgggacggc
tggcacttcacgctcgcgttcatgggggaggtcgacgaccgggtggtgccggagctgcgg
gaccggctcgcccgcggcgcgcaccgcaccgcgcccttcccgctgcgcctccacgggggc
gggcggttcgggcggcgtgtgctgtgggcgggcgccgcgggcgggctggacgagatgcgg
ctgctcgccgagcgcgcggacgcggcggcccggcgggcgggcgtcccgatggacgagcac
cgccgctaccaggcccacctgacggtcgcccgcagccgggacgacgccgtcgacctgcgg
cccttcgtggagcggctccgggaattcgacggctcccgctgggacgtgaccgagctggcc
ctggtgcgcagcaacctcccgcgcggcggtgcggcgggtgagcacccgcgttacgagacg
gtcggctcctggccgctcggaggggccggttaa
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