Streptomyces ficellus: EIZ62_21710
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Entry
EIZ62_21710 CDS
T06929
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sfic
Streptomyces ficellus
Pathway
sfic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EIZ62_21710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfic03400
]
EIZ62_21710
Enzymes [BR:
sfic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EIZ62_21710
DNA repair and recombination proteins [BR:
sfic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EIZ62_21710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PIF1
TraI_hel_assoc_N
PhoH
NPHP3_N
AAA_16
nSTAND3
DEAD
HTH_IclR
UvrD-helicase
UvrD_C
TrwB_AAD_bind
AAA
ABC_tran
ATPase_2
SLFN-g3_helicase
Cytochrome_CBB3
Motif
Other DBs
NCBI-ProteinID:
QGV80561
UniProt:
A0A6I6FBY3
LinkDB
All DBs
Position
4807882..4810107
Genome browser
AA seq
741 aa
AA seq
DB search
MSSLSVVEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGSLLGAQPGESLRMEGRWG
SHPSYGKQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPRIADRIVEHFGVGTLEVIEQE
PARLVEVPGLGPKRTRMIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYQDASISVV
RNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPDRVKAGLQYALSQSTDQGHCFLPEERL
ISDAVKLLQVDTGLVIDCLAALAADEEGVVREQVPGPEGQPLTAVYLVPFHRAEVSLAAQ
LQRLLRTGEDRMPAFRDVAWDKALAWLADRTGADLAPEQEEAVRLALTEKVAVLTGGPGC
GKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYDR
DRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLSDLLAPD
GPVPSVRLTRIFRQARQSGVVTNAHRINSGQQPLTSGLPDFFLFVAEETEEAGRLTVDVA
ARRLPAKFGLDPRRDVQVLAPMHRGPAGAGVLNGLLQQAVTPARPGLAEKRFGGRVFRVG
DKVTQIRNNYEKGANGVFNGTVGVVTSLDVDEQRLTVLTDEDEEVPYDFDELDELAHAYA
VTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVSA
GRRFTSLRHRLKGEVRVGNIT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtctgtcggtggtcgaaggggtcctcgagcggatcacgtacgccaacgaggag
aacggctacacggtggcccgggtcgacacggggcgcggtggcggggatctcctcacggtg
gtcggctcgctgctcggcgcgcagccgggggagtcgttgcggatggaggggcgttggggg
tcgcatccgagttacggcaagcagttcaccgtggagaactacacgaccgtcctcccggcc
accgtccagggcatccgccgctatctgggctccggactgatcaagggcatcgggccgcgc
atcgccgaccggatcgtggagcacttcggggtcggcacgctggaggtgatcgagcaggag
cccgcgcggctcgtcgaagtgccggggctggggccgaaacggacgaggatgatcggcgcc
gcgtgggaggagcagaaggcgatcaaggaggtgatggtcttcctccagggcgtgggcgtg
tccacctcgatcgccgtgcggatctacaagaagtaccaggacgcctcgatctccgtggtg
cgcaaccagccctaccggctggccgccgacgtgtggggcatcgggttcctgaccgccgac
cggatcgcgcaggcggtggggataccgcacgacagcccggaccgggtgaaggccgggttg
cagtacgcgctgtcgcagtccaccgaccaggggcactgcttcctgccggaggagcggctg
atctccgacgcggtgaagctcctccaggtcgacacgggcctggtcatcgactgcctggcc
gctctggcggccgacgaggagggggtcgtccgggaacaggtcccgggcccggaggggcag
ccgctgacggccgtctacctggtcccgttccaccgggccgaggtctccctggccgcccag
ctccagcggctgctgcggaccggtgaggaccggatgccggccttccgggacgtggcctgg
gacaaggcgctggcgtggctcgccgaccgtacgggtgccgatctggcgcccgagcaggag
gaggcggtgcgcctggcgctcaccgagaaggtggccgtgttgacgggcggccccgggtgc
ggcaagtcgttcacggtccggtcgatcgtggagctggcccgcgccaagaaggccaaggtg
gtcctcgcggcgcccaccggccgggccgccaagcggctggcggagctgaccggcgcggag
gcgtccacggtgcaccggctgctggagctgaagccgggcggggacgcggcgtacgaccgg
gaccggccgctcgacgccgacctggtcgtcgtcgacgaggcgtccatgctggacctgctg
ctggccaacaagctggtcaaggcggtggcgccgggcgcccacctgctgctggtgggggac
gtcgaccagctgcccagcgtgggcgcgggcgaggtgctgagcgacctgctggcgccggac
ggccccgtcccgtcggtgcggctgacccggatcttccggcaggcccggcagtccggtgtc
gtcaccaacgcgcaccggatcaactcgggtcagcaaccgctgacttccgggctgccggac
ttcttcctgttcgtcgccgaggagaccgaggaggcgggccggctcacggtggacgtggcc
gcccgccgcctgccggcgaagttcggcctcgacccgcgccgtgacgtgcaggtcctggcg
ccgatgcaccgtggcccggcaggcgcgggcgtcctgaacgggctgctccagcaggccgtc
acccccgcgagacccggcctggcggagaagaggttcggcggccgggtcttccgcgtcggc
gacaaggtcacccagatcaggaacaattacgagaagggtgcgaacggggtcttcaacggc
acggtcggcgtggtcacctcgctcgacgtggacgagcagcggctgacggtgctgaccgac
gaggacgaggaggttccttacgacttcgacgagctggacgagctggcgcacgcgtacgcg
gtgacgatccaccgctcccagggcagcgagtatccggcggtggtgatcccggtcaccacc
ggggcgtggatgatgctccagcgaaacctgctctacacggccgtcacgcgcgcgaagaag
ctcgttgtcctcgtgggctcacgcaaggcgatcgggcaggcggtccgcaccgtctcggcc
ggacggcgctttacctcactgcgccaccggctgaaaggtgaggtccgggtgggaaacatc
acctga
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