Streptomyces ficellus: EIZ62_22440
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Entry
EIZ62_22440 CDS
T06929
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sfic
Streptomyces ficellus
Pathway
sfic03030
DNA replication
sfic03430
Mismatch repair
sfic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EIZ62_22440 (holA)
03430 Mismatch repair
EIZ62_22440 (holA)
03440 Homologous recombination
EIZ62_22440 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfic03032
]
EIZ62_22440 (holA)
03400 DNA repair and recombination proteins [BR:
sfic03400
]
EIZ62_22440 (holA)
Enzymes [BR:
sfic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EIZ62_22440 (holA)
DNA replication proteins [BR:
sfic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EIZ62_22440 (holA)
DNA repair and recombination proteins [BR:
sfic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EIZ62_22440 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QGV80685
UniProt:
A0A6I6FMU0
LinkDB
All DBs
Position
4986187..4987173
Genome browser
AA seq
328 aa
AA seq
DB search
MATRKNQTDDVLAPVTLAVGQEDLLLDRAVQQVVAAARAADADTDVRDLTPDQLQPGALA
ELTSPSLFAERKVLVVRNAQDLSAETVKDIKAYVGAPVEDISLVLLHAGGAKGKGLLDAA
RKAGAREVACPKTTKPAERLTFVRGEFRALGRSATPEACQALVDAVGSDLRELASAVSQL
TSDVEGTIDEAIVGRYYTGRAEASSFNVADRAVEGRAAEALEALRWSLSTGVAPVLITSA
LAQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVAVALRAIAEADA
GVKGGGDDPEYALEKAVVTIARAARSRR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagaaagaaccagaccgacgacgtcctcgcgcccgtcaccctcgccgtgggg
caggaggacctgctcctcgaccgcgcggtgcagcaggtggtggcggccgcccgcgcggcc
gacgccgacacggacgtccgtgacctgacgcccgaccagctccagcccggcgccctcgcc
gagctgacgagcccctcgctcttcgccgaacgcaaggtgctggtcgtgcggaacgcgcag
gacctctccgccgagacggtcaaggacatcaaggcgtacgtcggcgcacccgtggaggac
atcagcctcgtcctgctccacgcgggcggcgcgaagggcaagggcctgctcgacgcggcg
cgcaaggccggagcgcgcgaggtcgcgtgcccgaagaccaccaagccggcggagcgcctg
acgttcgtgcgcggtgagttccgggcgctggggcggtcggccacaccggaggcgtgccag
gcgctcgtcgacgcggtcggcagcgacctgcgggagctggcgtccgcggtgtcgcagctc
acctcggacgtcgagggcaccatcgacgaggcgatcgtcggccggtactacacgggccgc
gcggaggcctccagcttcaacgtcgccgaccgggcggtggagggccgggcggcggaggcc
ctggaggcgctgcgctggtcgttgtcgaccggtgtcgcgcccgtgctgatcacgagcgcg
ctggcgcagggcgtccgggcgatcgggaagctgtcgtcggcgcggggcgggcgtcccgcc
gacctcgcacgtgagctcggcatgccgccgtggaagatcgaccgggtgcggcagcagatg
cggggctggacgccggacggcgtcgccgtcgcgctgcgcgccatcgccgaggcggacgcg
ggcgtcaagggcggcggcgacgacccggagtacgccctggagaaggcggtcgtcaccatc
gcccgcgcggcccgctcccgacgctga
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