Streptomyces finlayi: F0344_01670
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Entry
F0344_01670 CDS
T09573
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy00040
Pentose and glucuronate interconversions
sfiy01100
Metabolic pathways
sfiy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
F0344_01670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F0344_01670
Enzymes [BR:
sfiy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
F0344_01670
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QNE73493
UniProt:
A0A7G7BDS8
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Position
complement(328202..329755)
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AA seq
517 aa
AA seq
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MRRPFVLRLGAALATLAVAAVGGVVLSTPEASAATGSATGYATGNGGTTGGAGGQTVRAT
TGTAIHAALCGRASSSTPITIQVEGTINHGNTTKVSGTSCNTAAGVIELKQISNVTIVGV
GSGAVFDQLGIHIRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMESNVRNVWVDHTTLE
ASGGESEGYDGLFDMKDNTQYVTLSYSTLRNSGRGGLVGSSETELSNGFITYHHNLYENI
DSRAPLLRGGIAHMYNNYYVKLNESGINSRAGARAKVDNNYFKDSKDVLGTFYTTAAGYW
QVSGNTFDNVTWSGRSSENNPAGPNPTSNTTVAIPYAYSLDDASCVPAVVGQTAGADKGL
KVSDGSCSPQTPTPTPTNPTPTPTTPTPGPTTPTPPTGANLSIGAGSDGSSKADGTSYGN
VRDGDMNTYWSPAGSTGSVSVKWGSSTAVSSVNIREAAGSTGSIGSWKVVNGDTGAVLTS
GSGAGVISFPRTSLAKVTFQITGSTGTPKVAEFETYA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccattcgtactccgactcggtgcggccctggccacgttggccgtagcggcc
gtgggcggtgtggtgctctcgacgcccgaggcgtcggcggcgaccggcagcgccaccggc
tacgcgaccgggaacggcgggaccaccggcggcgcgggcgggcagactgtgcgggccacc
acggggaccgcgatccacgcggctctgtgcggccgggccagcagcagcaccccgatcacc
atccaggtcgaggggaccatcaaccacggcaacaccaccaaggtgtcgggcacgagctgt
aacaccgccgccggtgtcatcgagctcaagcagatcagcaacgtcacgatcgtcggtgtc
ggcagcggagcggtcttcgaccaactgggcatccacatccgcgagtcgagcaacatcatc
attcagaacgtgaccgtccggaatgtcaagaagtccggttcacccacgtccaacggcggc
gacgccatcggcatggagagcaacgtccgcaacgtctgggtggaccacaccaccctcgag
gcgtcgggcggggagtcggagggctacgacggtctcttcgacatgaaggacaacacccag
tacgtcaccctgtcctacagcaccctgcgcaactccggccgcggcggcctcgtcgggtcc
agtgagacggagctgtcgaacggcttcatcacgtaccaccacaacctgtacgagaacatc
gactcccgcgcgcccctgctgcggggcggcatcgcccacatgtacaacaactactacgtg
aagctcaacgagtccggcatcaactcccgtgccggggcccgtgccaaggtggacaacaac
tacttcaaggactccaaggacgtcctgggcaccttctacaccaccgcggccgggtactgg
caggtcagcggcaacaccttcgacaacgtgacctggtccggccgcagcagcgagaacaac
ccggccggacccaacccgacgtccaacaccacggtcgccatcccctacgcctacagcctc
gacgacgcgagctgcgtgccggccgtcgtgggccagacggcaggggccgacaaggggctg
aaggtatcggacggcagctgctcgccgcagacgccgaccccgacgccgaccaaccccaca
cccaccccgaccacacccacgccgggacccaccactcccaccccgcccacgggcgccaac
ctcagcatcggtgcgggctccgacggatccagcaaggccgacggaacgagctacggcaac
gtgcgggacggtgacatgaacacctactggtcgccggccggctcgaccggttccgtctcg
gtcaagtggggctcctccaccgcggtgtcctcggtcaacatccgggaggcggcgggctcc
acgggcagcatcggatcatggaaggtcgtcaacggcgacaccggtgccgtcctgacctcc
ggcagcggggcaggcgtcatcagcttcccccggacctcgctggccaaggtcacgttccag
atcaccggctcgaccgggaccccgaaggtcgccgagttcgagacctacgcctga
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