Streptomyces finlayi: F0344_08215
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Entry
F0344_08215 CDS
T09573
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sfiy
Streptomyces finlayi
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfiy03009
]
F0344_08215 (rimO)
Enzymes [BR:
sfiy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
F0344_08215 (rimO)
Ribosome biogenesis [BR:
sfiy03009
]
Prokaryotic type
ribosomal protein modification factors
F0344_08215 (rimO)
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
DUF3079
Motif
Other DBs
NCBI-ProteinID:
QNE74597
UniProt:
A0A7G7BGY2
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Position
complement(1804670..1806157)
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AA seq
495 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVENASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGTTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDASVALPGHAQEIAAAPDDLPEGVAPVSGPRAPLR
RRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVS
ENNTSYGKDLGDIRLLETLLPELAEVEGIERIRVSYLQPAEMRPGLIDVLTSTPKVAPYF
DLSFQHSAPEVLRAMRRFGDTDRFLELLATIRGKAPYAGARSNFIVGFPGETEADLAELE
RFLTGARLDAIGVFGYSDEDGTEAVGYENKLDADVIAERLAHISQLAEELTSQRAEERIG
ESLQVLVESVEEDGQVADGPVAVGRAAHQAPETDGQVVFTTREGLVPGRMVEAKVVGTEG
VDLVAEHHELAEVAR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactctcggatgcgcccgtaacgaggtggac
tcggaggagcttgcaggccgcttggcagcggacggctgggagctcgtcgagaacgcctcc
gacgccgatgtcgccgtcgtcaacacctgtgggttcgtcgaagccgccaagaaggactcc
gtcgacgccctcctcgaagccaatgatctgaaggaccacggcacaacccaggccgtggtc
gccgtcggctgtatggccgagcgttacggcaaggacctcgccgaggccctgccggaggcg
gacggggtgctcggattcgacgactacgccgatatctccgaccggctccagaccatcctc
aacggcggcatccacgcctcgcacacgcctcgcgaccggcgcaagctgctgccgatcagt
ccggcggagcgccaggacgcctccgtggcgctccccgggcacgcacaggagatcgccgcg
gcccccgatgacctgccggagggtgtcgctccggtctccggcccgcgcgccccgctgcgc
cgccggctcggtacgagccccgtcgcctcggtgaagctcgcctccgggtgcgaccgccgc
tgctccttctgcgccatcccctccttccgtggctccttcatctcccggcgtccctccgac
gtcctgggcgagacccgctggctggccgagcagggcgtcaaggaggtcatgctcgtctcc
gagaacaacacctcgtacggcaaggacctcggcgacatccgccttctggagacgctcctg
ccggaactggcggaggtcgaggggatcgagcggatcagggtcagctacctccagcccgcc
gagatgcgccccggcctgatcgacgtcctgacgtccacgcccaaggtcgccccgtacttc
gacctctccttccagcactccgcccccgaggtgctcagggccatgcgccgcttcggcgat
acggaccgtttcctggagctcctggccacgatccgcggcaaggcgccgtacgccggtgcc
cggtcgaacttcatcgtgggcttccccggtgagaccgaggccgacctcgcagagctggaa
cgcttcctcaccggagcccggctggatgccatcggcgtcttcgggtactccgacgaggac
ggcaccgaagcggtcggttacgagaacaagttggacgccgacgtgatcgccgagcgactc
gcccacatctcgcagctggccgaggaactgacctcgcagcgcgccgaggagcggatcggc
gagagtcttcaggtgctcgtcgaatccgtcgaggaggacggtcaggtcgctgacggcccg
gtcgcggtgggccgtgcggcacaccaggcgcccgaaacggacggacaggtcgtcttcacc
acacgcgagggactcgtgccgggccgtatggtcgaggcaaaggtcgtaggtaccgaggga
gtggacctcgtggccgaacaccacgagctcgcggaggtggccagatga
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