Streptomyces finlayi: F0344_08235
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Entry
F0344_08235 CDS
T09573
Name
(GenBank) HAMP domain-containing protein
Organism
sfiy
Streptomyces finlayi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
ATG17_like
DUF4795
Nup49_C
RNase_Y_N
Med21
ATG14
Motif
Other DBs
NCBI-ProteinID:
QNE74601
UniProt:
A0A7G7BGY6
LinkDB
All DBs
Position
complement(1811122..1816569)
Genome browser
AA seq
1815 aa
AA seq
DB search
MKKQRNATIDVDAAALNRLLSALVAMRDGNFRRRLTVSGDGVLTEVAAVFNEVADRNLHL
TGELARVRRVVGREGKLTERLETGACEGSWAAAIDASNELVDDLARPVSEVGRVLSAVAD
GDLEQRMELRSHTADETVRPLRGEFLKVARTVNNLVDQLSAFTEQVTRVAVEVGTEGKLG
GQAQVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTTAVAKGDLSRKVTVHVAGEMLQL
KNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQATVPGVAGVWKDLTDSVNTMAGNLTS
QVRGIAEVTTAVANGDLSQKVTVSARGEVAQLAETINQMTETLRTFADEVTRVASEVGGE
GLLGGQAQVPGAAGTWKDLTDSVNTVFRNLTTQVRDIAQVTTAVASGDMTQKVTVDVAGE
MLELKNTVNTMVDQLQSFGSEVTRVAREVGVEGRLGGQAEVPGAAGTWKDLTDSVNTAFR
NLTGQVRDIAQVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVAQLSSFADQVTRMARD
VGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQVRQIAQVTTAVARGDLSQKIDVD
ARGEILELKNTINTMVDQLSAFAEQVTRVAREVGTDGRLGGQAQVPGVAGVWRDLTDSVN
GMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEILELKNTLNTMVDQLSNFAEQVTR
VAREVGTEGILGGQAEVQGVSGTWKDLTQSVNGMANNLTMQVRNIAEVTTAVAKGDLSKK
ITVDAKGEILELVTTVNTMVDQLLNFADEVTRVAREVGTEGILGGQARVRGATGIWKDLS
DNVNLMANNLTSQVRNISRVSSAVANGDLTKKVTVEARGEVAELADTVNTMVTTLSSFAD
EVTRVAREVGTEGELGGQARVPGVAGTWKDLTESVNSMASNLTGQVRQIATVTTAIAKGD
LTKKIDIDARGEIQELKNTINTMVDQLSSFAEQVTRVAREVGTEGQLGGQARVRDVDGTW
RDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLNLKIDVDAAGEIQVLQDNINTMIANLR
DTTLANKEQDWLKGNLARISGLMQGRRDLDDVASLIMSELTPVVSAQHGAFFLAMTAGDT
DEVGADDGRESAYVLHMRGSYGYSAGSMPTTFRPGETLIGTAAEEKRTIQVDNVPPGYLK
ISSGLGEAPPAHVIVLPVLFEGKILGVIELASFQPFTHIQRDFLNQLAEMIATSVNTISV
NTKTEKLLEQSQELTEQLRDRSQELENRQKALQASNAELEEKAELLAQQNRDIEVKNTEI
EEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAKLLADNAEGNLSPKQVE
FAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVDYVEATFRPLTAEKGLD
FSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGAVELVIRPAGADVPDSIREHLL
EAGSLRDADADLIAFSVTDTGIGIASSKMLVIFEAFKQADGTTSRKYGGTGLGLSISREI
ARLLGGEIHAASEPGRGSTFTLYLPLHASELPSQGYPQMGPGSIEAHGNAVESGFRPEMP
TAHGAGAQPPLGDPAATAGMFRRRRKALGGSARQTALPSGSQSAGGAAHEEWVQETPTGQ
EGQEPRRTFRFHGEKVLIVDDDIRNVFALTSVLEQHGLSVLYAENGREGIEVLEQHDDVT
VVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAIDCGASDYVTKPVD
SDHLLSVMEQWMRGE
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaacagcgcaatgcaaccattgatgtggacgcggcagctctgaacagactgctg
tcggccctcgtggcgatgcgtgacgggaatttccgcaggcggctgaccgtctccggcgac
ggggtgctgaccgaggtcgcggcggtcttcaacgaggtcgcggaccggaatctccacctc
acgggcgagctggcacgtgtacgtcgcgtggtcggacgtgagggaaagctcaccgagcga
ctggagaccggggcctgtgaggggtcctgggcggctgccatcgatgcgtccaacgagctc
gtggacgatctggcacggccggtgtcggaggtcgggcgggtgctgtcggcggtcgccgac
ggtgacctggagcagcgtatggagctgcggtcgcacacggccgacgagacggtacggccg
ttgcgtggtgagttcctgaaggtcgcgcgcacggtcaacaatttggttgaccagttgtcg
gcgttcaccgagcaggtgacgcgggtcgcggtcgaggtgggcaccgaaggcaagctgggc
gggcaggcccaggtacgtggcatgtccggttcgtggaaagacctcacggactccgtgaac
accatggcgtaccggctgacggcgcaggtgcgtgacatcgcactcgtgacgacggcggtc
gccaagggcgatctgtcgcggaaggtcaccgttcacgtggccggcgagatgctgcagctg
aagaacaccgtcaacacgatggtggaccagctgtcgtcgttctcctccgaggtgacccgg
gtcgcacgtgaggtgggtacggagggtgagctgggcggtcaggccacggtgcctggcgtg
gccggggtgtggaaggacctgaccgactccgtcaacacgatggccgggaacctgacgtcc
caggtgcgcggtatcgccgaggtgacgacggcggtggccaacggtgacctgtcccagaag
gtcacggtgagcgcgcgcggcgaggtcgcgcagctggccgagacgatcaaccagatgacc
gagacgctgcggaccttcgcggacgaggtcacccgggtggcgagcgaggtcggtggcgag
gggctgctgggtggtcaggcccaggtgccgggtgcggccgggacgtggaaggacctcacc
gactcggtgaacacggtcttccggaacctgacgacccaggtgcgggacatcgcgcaggtg
acgacggcggtggccagcggcgacatgacgcagaaggtcacggtcgacgtggccggcgag
atgctggagctgaagaacaccgtcaacacgatggtggaccagctgcagtccttcggttcg
gaggtgacccgggtcgcgcgggaggtcggcgtcgagggccggctcggcgggcaggcggag
gtgccgggtgcggcggggacgtggaaggacctgaccgactcggtgaacacggcgttccgg
aacctgacgggtcaggtgcgggacatcgcgcaggtgaccaccgcggtcgcgaacggtgat
ctgtcgcagaaggtcacggtcgacgtggccggcgagatgctggagctgaagaacaccgtc
aacacgatggtggcgcagctgtcctcgttcgccgaccaggtgacccggatggcgcgggac
gtgggtacggagggccgcctgggcggccaggcacgggtcgacggtgtctccggtacgtgg
aaggagctcaccgactccgtcaacttcatggcggggaacctgacctcccaggtgcgtcag
atcgcgcaggtgaccacggcggtggcccggggcgatctgtcgcagaagatcgatgtggat
gcccggggcgagatcctggagctgaagaacaccatcaacacgatggtcgaccagctctcc
gccttcgccgagcaggtgacccgggtggcccgcgaggtgggtacggacgggcggctcggt
ggccaggcgcaggtgccgggcgtggccggtgtgtggcgtgatctgaccgattccgtgaac
ggaatggcagggaacctgaccgctcaggtccgtaacatcgcccaggtcgccacggcggtg
gcccggggcgatctgtcgcagaagatcgatgtggatgcccggggcgagatcctggagctg
aagaacaccctcaacacgatggtggaccagctgtccaacttcgccgagcaggtgaccagg
gtcgcccgcgaggtgggtacggaaggcatcctgggcggccaggccgaggtgcagggtgtg
tccggtacgtggaaggacctgacccagtccgtcaacggcatggcgaacaacctgaccatg
caggtgcgcaacatcgcggaggtcaccacggcggtcgccaagggtgacctctccaagaag
atcaccgttgacgccaagggcgagatcctcgaactggtgacgaccgtcaacacgatggtc
gaccagctgctgaacttcgcggacgaggtcacgagggtcgcccgtgaggtgggtaccgag
ggcatcctcggcggtcaggcccgggtgcgtggcgcgacgggcatctggaaggacctcagc
gacaacgtcaacctgatggccaacaacctgaccagtcaggtgcgcaacatctcccgggtc
tcctccgcggtcgccaacggcgatctgacgaagaaggtcacggtcgaggcgcgcggcgag
gtcgccgagctcgcggacacggtcaacacgatggtgacgacgctgtcctcgttcgccgac
gaagtgacgcgtgtggcccgtgaggtgggtacggagggcgagctggggggccaggctcgc
gtcccgggtgtcgcgggtacctggaaggacctcaccgagtcggtgaactcgatggcgtcc
aacctgaccggtcaggttcggcagatcgcgacggtgaccacggcgatcgccaagggtgat
ctgaccaagaagatcgacatcgacgcgcgtggtgagatccaggaactgaagaacacgatc
aacacgatggtcgaccagttgtcgtcgttcgccgagcaggtgacccgggtggcccgcgag
gttggcaccgaggggcagctgggcggtcaggcccgggtccgggacgtggacggcacctgg
cgcgacctcaccgaatcggtgaacgagatggccgggaacctcacccggcaggtgcgcgcc
atcgcggccgtcgccaccgcggtgacccgtggcgatctcaatctcaagatcgacgtcgat
gcggccggcgagatccaggtgctgcaggacaacatcaacaccatgatcgcgaacctgcgc
gacacgaccctggccaacaaggagcaggactggctcaagggcaacctcgcccggatctcc
ggtctgatgcagggccgccgcgatctggacgacgtggcgtcgctgatcatgagcgagctg
actccggtggtctccgcccagcacggcgcgttcttcctggccatgacggccggtgacacc
gacgaggtcggtgcggacgacggccgggagagcgcgtacgtgctgcacatgcgcggcagc
tacggctactcggccggttcgatgccgacgaccttccggcccggtgagacgctcatcggg
acggccgccgaggagaagcggacgatccaggtggacaacgtgccgccgggttacctgaag
atctcctccggtctcggggaggcaccgcccgctcatgtgatcgtgctgccggtgctcttc
gaggggaagatcctcggcgtgatcgagctggcctcgttccagccgttcacgcacatccag
cgggacttcctcaaccagctcgccgagatgatcgcgacgagcgtcaacaccatcagcgtc
aacacgaagacggagaagctccttgagcagtcccaggagctgaccgaacagctccgcgac
cgctcgcaggagttggagaaccggcagaaggcgcttcaggcgtccaacgccgaactggag
gagaaggccgagctgctggcccagcagaaccgcgacatcgaggtgaagaacaccgagatc
gaggaggcccgtcaggtgctggaggagcgtgccgagcagctcgcggtctccatgcgctac
aagtccgagttcctggcgaacatgtcgcacgagctgcgtacccccctcaactcgctgctc
atcctggccaagctgctcgcggacaacgccgagggcaatctctcgccgaagcaggtcgag
ttcgccgagacgatccacggggccggttccgatctgctccagctgatcaacgacatcctc
gatctctcgaaggtcgaggcgggcaagatggatgtcagtccgacccggatcgcgctggtc
cagctggtcgactacgtcgaggcgacgttccggccgctcaccgcggagaaggggctcgac
ttctccgtgcgggtgtcgccggagcttccggccacgctgcacacggacgagcagcggctc
ctgcaggtgctgcgcaacctcctgtccaacgcggtgaagttcaccgacagcggggccgtc
gagctggtgatcaggccggccggtgccgatgtgcccgactcgatccgggagcatctgctg
gaagcgggttcgctgcgggacgccgacgccgatctgatcgcgttctcggtcactgacacc
ggcatcgggatcgcttccagcaagatgctggtgatcttcgaggcgttcaagcaggcggac
gggacgaccagccgcaagtacggcggcacgggcctcggcctctccatcagccgggagatc
gcccggctgctgggcggtgagatccacgcggcgagcgagccgggccgtggttcgaccttc
acgctctacctgccgctgcacgcgagcgaactgccctcgcagggttacccgcagatgggg
cccggctccatcgaggcgcacggcaacgcggtcgagagcggtttccgtccggagatgccg
acggcccacggagccggggcgcagcccccgctgggtgacccggcggctacggccgggatg
ttccggcgccggcgcaaggccctgggcggttccgctcggcagaccgctctgccgagcggc
tcgcagagcgcggggggcgcggcgcacgaggagtgggtgcaggaaacgccgacggggcag
gaggggcaggagccgcggcggacgttccggttccatggcgagaaggtgctgatcgtcgac
gacgacatccgtaacgtcttcgcgctcaccagtgtgctggagcagcacggcctgtcggtg
ctgtacgcggagaacggccgtgagggcatcgaagtcctggagcagcacgacgatgtgacg
gtcgtactgatggacatcatgatgcccgagatggacggttacgcgacgacgacggcgatc
cgcaggatgccgcagttcgcggggctgccgatcatcgcgctcaccgcgaaggcgatgaag
ggtgaccgggagaaggcgatcgactgcggcgcttctgactatgtcaccaagccggtcgat
tctgatcacttgctgtccgtcatggagcagtggatgcgcggagagtga
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