Streptomyces finlayi: F0344_08305
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Entry
F0344_08305 CDS
T09573
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0344_08305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfiy03019
]
F0344_08305
03016 Transfer RNA biogenesis [BR:
sfiy03016
]
F0344_08305
Enzymes [BR:
sfiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F0344_08305
Messenger RNA biogenesis [BR:
sfiy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F0344_08305
Transfer RNA biogenesis [BR:
sfiy03016
]
Prokaryotic type
tRNA degradation factors
F0344_08305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QNE79129
UniProt:
A0A7G7BUW4
LinkDB
All DBs
Position
complement(1833339..1835552)
Genome browser
AA seq
737 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKRPKDQ
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTMLAGLPFSGPIGATRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVQDGAEAPTEEIVAAGLEASKPFIKGLC
KAQSDLAAKAAKPTGEFPVFLDYQDDVLEALTSAVRTELAKALTIAGKQEREAELDRIKE
IAGEKLLPAFEGREKEISGAYRALTKKLVRERVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPSREDFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISEEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKTFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAQQGSQAEAARATINAIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLAIGSKVQVEIAEIDSRGKLSL
IPVVEGEEADEKDDTDK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgttattgacaacggaaccttcggcacccgc
acgatccgcttcgagacgggccgcctcgccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaggcccaaggaccag
ctcgacttcttccccctcacggtggacgtcgaggagcggcagtacgcggccggcaagatc
cccggctcgttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgcgatcaacgcc
gcgtcctgctccacgatgctggccggtctgcccttctccggccccatcggcgccacccgc
gtcgccctgatcaagggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggtcgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctcgtccaggacggcgccgaggctccc
accgaggagatcgtcgccgcaggtctggaagcctccaagcccttcatcaagggcctctgc
aaggcccagtccgacctcgccgccaaggctgccaagcccaccggcgagttcccggtcttc
ctcgactaccaggacgacgtcctggaggcgctcacctccgccgtgcgcaccgagctcgcc
aaggcgctcaccatcgccggcaagcaggagcgcgaggccgagctggaccgcatcaaggag
atcgccggcgagaagctcctcccggccttcgagggccgcgagaaggagatctcgggtgcc
taccgcgcgctgaccaagaagctggtccgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgcggcgtcacggacatccgtacgctggccgccgaggtcgaggccatcccgcgc
gtgcacggttcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccggatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggagcgctcgccgagcgcgccatcgtgccggtgctgccc
tcgcgcgaggacttcccctacgcgatccgtcaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtccctgctgaacgccggtgtgccc
ctcaaggccgccgtcgccggtatcgccatgggtctgatctccgaggagatcgacggcaag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgcgttcggtgacatggac
ttcaaggtcgctggtacgaagaccttcgtgaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgtgacgcgcgtctgcac
atcctggacgtcatgaacgaggccatcgacgttccggacgagatgtccccgaacgccccg
cggatcatcacggtcaagatcccggtggacaagatcggtgaggtcatcggcccgaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgcccagcagggctcgcaggccgaggccgcccgcgccacgatcaac
gcgatcgccaacccgaccatgccggaggtcggcgagcgttacctgggtacggtcgtcaag
accaccaccttcggtgccttcgtctccctcatgcccggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcgcg
atcggctccaaggtccaggtcgagatcgctgagatcgactcccgcggaaagctctccctc
atccccgtggtcgagggcgaagaggccgacgagaaggacgacaccgacaagtga
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