Streptomyces finlayi: F0344_10280
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Entry
F0344_10280 CDS
T09573
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
F0344_10280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfiy03400
]
F0344_10280
DNA repair and recombination proteins [BR:
sfiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
F0344_10280
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
QNE74949
UniProt:
A0A7G7BHY4
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All DBs
Position
complement(2281634..2282821)
Genome browser
AA seq
395 aa
AA seq
DB search
MRSIWNGAISFGLVSIPIKLVNATENHSISFRQIHLEDGGRIRYRKVCELDEREVTAADI
GKAYEDADGSMIPITDEDLAALPLPTAKTIEIVAFVPASEIDPLQMEAAYYLSANGVPAA
KPYTLLREALKRSRKVAVAKFALRGRERLGMLRVVDDVIAMHGLLWPDEIRAPEGVAPDT
EVTVRDAELDLADALMDTLGEVDMDTLHDDYREAVEALVAAKASGETLEAPAGGGDQGGK
VIDLIAALENSVRAAKKSRDEEADQGASEGEDAEVHPIKGRGTARKTTRKAPEKTAEKTA
EKTTHRTPTGKTVTRSGEGAVKKSSARSSPKSSDTKKSTAAPRKTAAKKTTTRKATSESK
SSTARKSSSSGGTAKSTTAKKATAGKATAKKRASA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtccatttggaacggcgccatctccttcgggctggtcagcattccgatcaaactg
gtcaacgccaccgagaaccattcgatctccttccggcagatccatctcgaggacggtggc
cggatcaggtaccgcaaggtgtgcgaactcgacgagcgggaagtgacggcggcggacatc
ggcaaggcctacgaggacgccgacggctcgatgatcccgatcaccgacgaggacctggcc
gcgcttccgctgccgaccgccaagacgatcgagatcgtcgcgttcgtgcccgcctccgag
atcgatccgctccagatggaagccgcgtactacctctccgcgaacggcgtcccggcggcc
aagccgtacacgctgctgcgcgaggcactcaagcgaagccggaaggtggctgtcgcgaag
ttcgccctgcgcggccgtgaacggctcgggatgctgcgcgtggtcgacgacgtgatcgcg
atgcacggcttgctgtggccggacgagatccgcgcccccgagggcgtcgcccccgacacc
gaggtcacggtgcgcgacgccgaactcgacctggcggacgccctgatggacaccctcggg
gaggtcgacatggacaccctccacgacgactaccgcgaggcggtcgaggcgctcgtcgcg
gcgaaggcgtcaggcgagacgctggaggctccggccgggggcggtgaccagggcggcaag
gtcatcgacctgatcgcggctctggagaacagcgtccgcgcggcgaagaagtcccgggac
gaggaggcggaccagggggcgagcgagggcgaggacgcggaagtccacccgatcaagggt
cgcgggacagccaggaagaccacccggaaggcccccgagaagaccgccgagaagaccgcc
gagaagaccacgcacaggacgccgacgggcaagacggtgacgcgctcgggcgagggcgcg
gtgaagaagtcctccgccaggtcgtcccccaagtcctccgacacgaagaagtccacggcg
gcccccaggaagacggccgcgaagaagaccaccacccgcaaggcgacctcggaatcgaag
tcgtccacggcgaggaagtcctcgtcgagcggcggcacggcgaagtcgaccacggcgaag
aaggccaccgccgggaaggccaccgcgaagaagcgcgcgtcggcctga
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