Streptomyces finlayi: F0344_11100
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Entry
F0344_11100 CDS
T09573
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy03420
Nucleotide excision repair
sfiy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F0344_11100
03430 Mismatch repair
F0344_11100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfiy03400
]
F0344_11100
Enzymes [BR:
sfiy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0344_11100
DNA repair and recombination proteins [BR:
sfiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0344_11100
MMR (mismatch excision repair)
Other MMR factors
F0344_11100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Motif
Other DBs
NCBI-ProteinID:
QNE75080
UniProt:
A0A7G7BIB5
LinkDB
All DBs
Position
complement(2457715..2459943)
Genome browser
AA seq
742 aa
AA seq
DB search
MTAATHSTLFPQVPESPDAVLEGLDPEQREVATALSGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPTTVLAVTFTNRAAGEMRGRLRQLGATGVQARTFHSAALRQLQYFWPKAVGGE
LPRLVERKVQLVAEAAARCGIKLDRNELRDATSEIEWAKVTQTVPGDYPAAVAKTQRDAP
RDPAELSQIYAMYEQLKRDRSVIDFEDVLLLTVGILQDRHDIADHVRSQYQHFVVDEYQD
VSPLQQRLLDLWLGDRDTLCVVGDASQTIYSFTGATPDHLLNFRTRHPNATMVKLVRDYR
STPQVVHLANGLLSQARGKAAEHRLELVSQRDKGPAPAYTEYTDEPAEAEGTARRIRELI
AAGVPAGEIAVLYRVNSQSEVYEQALADAGVPYQLRGAERFFERAEVREAGMALRGAARA
GGNDSLLDQAEGLPSEVRAVLSTKGWTSRPPAGSGAVRDRWESLAALVRLAEDFERAKPG
ATLSDLVAELDERAAAQHAPTVQGVTLASLHSAKGLEWDAVFLVGLTEGMMPITYAKTDE
QVEEERRLLYVGVTRARLHLTLSWALSRSPGGRGGRRATRFLNGLRPGSVALGTRGGTGG
GGGIDRGSGTGAGAGGSGPDAAVRRKRGGPVRCRVCGRTLTEAGEMKLMRCEDCPSDMDE
ALYERLRDWRAGQAKVIGQPAFCVFTDKTLMAIAEAVPATEGELVTIAGVGNRKLTSFGA
DVLAICAGEAMGEEAGEGEGEA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcattccaccctcttcccacaggtccccgagtccccggacgccgtg
ctcgaagggctcgaccccgagcagcgcgaggtcgcgaccgctctgagcggacccgtgtgt
gtgctggccggagccggtacgggcaagacgcgcgcgatcacccatcgcatcgcgtacggg
gtgcgcgcggggatactccagccgacgaccgtgctggctgtcaccttcaccaaccgcgcg
gccggcgagatgcgcggtcgcctccgtcagctcggagccaccggtgtgcaggcgcggacc
ttccactccgcggccctgcgccagctccagtacttctggccgaaagcagtcggtggcgag
ctcccgcgactggtcgagcgcaaggtccagctggtcgccgaggccgcggcccgctgcggg
atcaagctcgaccgcaacgagctgcgggacgccacgagcgagatcgagtgggccaaggtc
acccagaccgtgcccggcgactatcccgccgcggtcgccaagacccagcgggacgccccg
cgcgatccggccgagctctcccagatctacgcgatgtacgagcagctgaagcgtgaccgc
tccgtgatcgacttcgaggacgtgctgctcctcaccgtcggcatcctccaggaccggcac
gacatcgcggaccacgtccgcagccagtaccagcacttcgtggtcgacgagtaccaggac
gtcagtcccctccagcagcgcctgctggacctctggctcggcgaccgggacaccctgtgc
gtcgtcggcgacgcaagccagacgatctactccttcacgggagcgacccccgaccatctg
ctgaacttccgcacccgccatccgaacgccaccatggtcaagctggtccgggactaccgc
tccacgccccaggtcgtccacctggccaacggcctgctgagccaggcccgcggcaaggcc
gccgagcaccggctcgaactggtctcgcagcgcgacaagggccccgcccccgcctatacg
gagtacacggacgaaccggcggaggcggagggcaccgcacgccgtatccgcgagctgatc
gccgcaggtgtcccggccggcgagatcgccgtgctctaccgcgtcaactcccagtccgag
gtctacgaacaggcccttgccgacgcgggcgttccctaccagctgcggggagcggagcgc
ttcttcgagcgcgcggaggtccgggaagcgggcatggccttgcgcggcgccgcccgcgcc
gggggcaacgactccctgctcgaccaggccgaggggctgccctccgaggtgcgggcggtg
ctctccaccaagggctggacgagcaggccgccggccggctccggtgcggtgcgggatcgc
tgggagtcgctggccgccctggtgcggctcgccgaggacttcgaacgggccaagcccggg
gcgaccctctccgacctcgtggccgagctcgacgagcgggctgccgcccagcacgcgccc
accgtccagggagtcacgctggcttctctgcactcggcgaagggcctggaatgggacgcc
gtgttcctggtcgggctgaccgagggcatgatgccgatcacgtacgccaagaccgacgaa
caggtcgaggaggagcggcgtctgctctacgtcggcgtcacccgggcacgtctccacctc
acgctgtcgtgggcgctctcccgttcgcccggcggccggggcggccggcgggccacacgc
ttcctgaacgggctgcggcccggctcggtggcgctcggcacccgcggcggcactggaggc
ggcggaggcatcgaccgcggttccggtacgggcgcgggagcgggtggcagcggtccggac
gcggcggtcaggcgcaagcgcggcggccccgtgcggtgccgagtctgcggcaggacgctc
accgaggccggtgagatgaagctgatgcgttgcgaggactgcccctccgacatggacgag
gcgctgtacgagcggctgcgcgactggcgggccggacaggcgaaggtgatcgggcagccc
gcgttctgcgtgttcacggacaagacgctgatggcgatcgccgaggccgtgccggccacc
gagggcgaactcgtcaccatcgccggcgtcggcaaccggaagctgaccagtttcggcgcc
gatgtgctggccatctgcgcaggtgaggccatgggtgaagaggccggggagggcgagggc
gaggcgtga
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