Streptomyces finlayi: F0344_27810
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Entry
F0344_27810 CDS
T09573
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F0344_27810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfiy03400
]
F0344_27810
Enzymes [BR:
sfiy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
F0344_27810
DNA repair and recombination proteins [BR:
sfiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
F0344_27810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QNE77896
UniProt:
A0A7G7BRD1
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All DBs
Position
complement(6054920..6055783)
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AA seq
287 aa
AA seq
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MRNPVGAHVPVAGGLAKVGLDYARELGAEAVQVFAANPRGWATPPGNPAQDELFRTECAA
RSVLAYVHAPYLINFGSHTQATVERSADSLRHSLRRAREIGALGVVVHTGSATDGRPPSE
ALAQVREHMRPLLDELTHDDDPYLLLESTAGQGSSLCSRTWDFGPYFEALDSHPRLGICL
DTCHIYAAGHDLTGPAGMRQTLDLLVDTVGEGRLKLIHANDSKDVVGAHKDRHENIGAGH
IGAEPFRELFSHPATDGVPLIIETPGGKAGHAADVARLKELRDPEES
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacccggtaggcgcccacgtcccggtggcgggcgggctcgccaaggtcggcctc
gactacgcgcgcgagctgggcgcggaggccgtacaggtcttcgccgccaatccgcgcggc
tgggcgacgccgcccgggaatcctgcgcaggacgagctgttccgcacggagtgcgcggcc
aggtcggtcctggcgtacgtccacgccccgtatctgatcaatttcggctcgcacacccag
gccactgtcgagcggtccgcggactccctgcgccactccttgcgcagggccagggagatc
ggcgcgctgggcgtcgtggtgcacacgggttcggcgaccgacgggcgtccgccttcggaa
gccctcgcgcaggtgcgcgagcacatgaggccgctactcgacgagctgacgcatgacgac
gacccgtatctgctgctggagtcgacggccgggcagggctcctcgctctgctcgcgcacc
tgggacttcggcccgtacttcgaggcgctcgactcccatccccgactgggcatctgcctg
gacacctgccatatctacgcggcgggacacgatctgaccggcccggcgggtatgcgtcag
accctcgatctgctggtggacaccgtcggcgagggccggctgaagctgatccacgcgaac
gactccaaggacgtggtgggagctcacaaggaccggcacgagaacatcggcgccggtcac
atcggtgcggagccgttccgcgagctgttctcccacccggcgacggacggggttcccctg
atcatcgagacccccggcggcaaggcggggcatgcggcggacgtggctcggctgaaggag
ctacgtgatcccgaagaatcttga
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