Streptomyces finlayi: F0344_28060
Help
Entry
F0344_28060 CDS
T09573
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy03030
DNA replication
sfiy03430
Mismatch repair
sfiy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0344_28060 (dnaE)
03430 Mismatch repair
F0344_28060 (dnaE)
03440 Homologous recombination
F0344_28060 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfiy03032
]
F0344_28060 (dnaE)
03400 DNA repair and recombination proteins [BR:
sfiy03400
]
F0344_28060 (dnaE)
Enzymes [BR:
sfiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0344_28060 (dnaE)
DNA replication proteins [BR:
sfiy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F0344_28060 (dnaE)
DNA repair and recombination proteins [BR:
sfiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F0344_28060 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QNE77939
UniProt:
A0A7G7BRH4
LinkDB
All DBs
Position
6112105..6115644
Genome browser
AA seq
1179 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFEACNEMGMSHIAMTDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRKHKRKVQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNLFRL
SSDAYAEGWLQKWPRMDRETISQWSEGLIASTGCPSGEVQTRLRLGQFDEAVQAASDYKD
IFGEGRYFLELMDHGIEIERRVRDGLLEIGKKLDIPPLVTNDSHYTYANEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKTTEEMYGVDSSDAWQQGCANTLLVAQQIDTAGMFEAKN
LMPKFDIPEGYTEITWFQEEVRVGMNRRFPNGVPEDRQKQVEYELDIIIQMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVSYAMGITDLDPIEHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPKHPRYSEAGEIRGMYENEPDVRKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVEA
NKGIKLDLLSLSLDDPRTYELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNNRQEITPIHPELEEPLKEVLGLTYGLIVYQEQVQKAAQIVAG
YSLGEADILRRVMGKKKPEELAKNFVLFEAGAKEKGFSDAAIKALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAGLLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
VSNFAAQGDDVILFGLTAIRNVGQNVVDSIIKTRKAKGKYSSFPDFLDKVEAIVCNKRTV
ESLIKAGAFDEMGHTRKGLVAHHEPMIDNVVQVKRKEAEGQFDLFGGMGEEESDEPGFGL
DVEFSDIEWEKSYLLAQEREMLGLYVSDHPLFGIEHVLSDKSDAAISQLTGGEHADGAIV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDVPRLVAMEMQVPDISSAGTNAPVVLTIPTVKITPPMVSRLGEVLSSHRGDTEVRI
RLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcaccttcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgaggcgtgcaacgagatgggcatgtcgcacatcgcg
atgacggaccacggcaacctgcacggcgcctacgacttcttccattcggcgaagaaggcg
ggtgtgacaccgatcatcgggatcgaggcgtacgtcgctcccgagtcgcgcaagcacaag
cgcaaggtccagtgggggcagccgcaccagaagcgcgacgacgtgtccggttcgggtggc
tacacgcacaagacgatctgggcggcgaacagcaccgggctgcacaacctcttccggctg
tcctcggacgcgtacgccgagggctggctccagaagtggccccgcatggacagggagacc
atctcccagtggtccgaggggctgatcgcgtccaccgggtgtccctccggtgaggtgcag
acccggctgcggctcggccagttcgacgaggcggtccaggcggcctcggactacaaggac
atcttcggcgagggaaggtacttcctggagctgatggaccacgggatcgagatcgagcgc
agggtccgcgacggcctgctggagatcggcaagaagctcgacatcccgccgctcgtgacg
aacgactcgcactacacgtacgcgaacgaggccactgcgcacgacgcgctgctctgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccgggtactac
ctcaagacgaccgaggagatgtacggcgtcgactcctccgacgcctggcagcagggctgt
gcgaacaccctcctggtcgcccagcagatcgacaccgccggcatgttcgaggcgaagaac
ctcatgccgaagttcgacatccccgagggctacacggagatcacctggttccaggaagag
gtccgggtcggcatgaaccgccgcttcccgaacggtgtccccgaggaccggcagaagcag
gtcgagtacgagttggacatcatcatccagatggggttcccggggtacttcctcgtcgtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtcggccccggacgaggctcg
gcggccggctcgatcgtgtcgtacgccatgggcatcaccgacctcgacccgatcgagcac
gggctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtcatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggaaagatcaaggccaagaacgcgatcaaggac
tccgcccgcgtcctcggctacccgtacgccatgggcgaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgaccccaagcacccgcgc
tacagcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtccgcaaggtc
atcgacaccgcgaagggcgtcgagggactggtccggcagatgggcgtgcacgccgcgggc
gtcatcatgtccagcgagccgatcgtcgaccacgccccgatctgggtgcggcacaccgac
ggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcggaacctgaccatcatggacgacgccgtcaagatggtggaggcc
aacaagggcatcaagctcgacctgctctccctctcgctggacgaccccaggacgtacgaa
ctgctctgccgcggtgacacgctcggggtgttccagttcgacggcgggccgatgcgttcc
ctgctgcgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctgtac
cggccgggcccgatgggaatgaactcgcacacgaactacgccgagcggaagaacaaccgc
caggagatcaccccgatccacccggagctggaggagcccctcaaggaggtcctcggcctc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcgtcgccggg
tactcgcttggcgaagccgacatcctgcgccgtgtgatgggcaagaagaagcccgaggag
ctggcgaagaacttcgtcctcttcgaggcgggcgccaaggagaagggcttctccgacgcg
gcgatcaaggcgctgtgggacgtcctggtgcccttcgccgggtacgccttcaacaaggcg
cactcctcggcgtacggcctggtcacctactggacggcgtacctcaaggcgaactacccg
gccgagtacatggcggggctcctcacgtccgtgaaggacgacaaggacaagtccgcggtc
tatctcaacgagtgccggcgcatgggcatcaaggtgctgccgcccaacgtcaacgagtcg
gtgtccaacttcgccgcccagggcgacgacgtgatcctcttcggcctgaccgccatccgc
aacgtcggccagaacgtcgtggactcgatcatcaagacccgcaaggcgaaggggaagtac
agctccttccccgacttcctcgacaaggtcgaggcgatcgtctgcaacaagcgcaccgtc
gagtccctgatcaaggccggcgccttcgacgagatgggccacacccgcaagggtctcgtg
gcgcatcacgagccgatgatcgacaacgtggtccaggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgaggaggagagcgacgagcccggcttcgggctc
gacgtggagttctccgacatcgagtgggagaagtcctacctgctcgcccaggaacgcgaa
atgctcggcctgtacgtctcggaccacccgctcttcggcatcgagcacgtcctgtccgac
aagtcggacgccgcgatctcccagctcaccggcggtgagcacgcggacggcgcgatcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtcgaggacctcgcgggctccatcgagtgcatgttcttccccgccacg
taccagctggtctccacccagctcgtggaggacaccgtcgtcttcgtcaaggggcgtctc
gacaagcgcgaggacgtaccgcgtctggtcgccatggagatgcaggtccccgacatctcg
tccgccggcaccaacgcaccggtcgtgctgaccatccccacggtcaagatcaccccgccg
atggtcagccgcctcggtgaggtgctcagcagccaccgcggcgacaccgaggtacggatc
aggctgcagggcccccgcaagaccaccgtgctccggctggaccggcaccgggtgaagccg
gaccccgcgctgttcggggacctgaaggtgctgctcggcccgtcctgcctggccggctga
DBGET
integrated database retrieval system
