Streptomyces finlayi: F0344_28950
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Entry
F0344_28950 CDS
T09573
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy00040
Pentose and glucuronate interconversions
sfiy01100
Metabolic pathways
sfiy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
F0344_28950
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F0344_28950
Enzymes [BR:
sfiy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
F0344_28950
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QNE78089
UniProt:
A0A7G7BRX4
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Position
6310721..6312025
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AA seq
434 aa
AA seq
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MRTSTCHGRVIAMLAGCTVLVLAATGTAQAAAHHRPDPTRQTLAAQDGWASEGTGTTGGS
AADADHVFTVTTWAEFKAALTAAAGAPSIIRIKGVIDATSEGCASFEAPGYDFDRYLADY
DPAVWGMDKEPAGEQEDLRAASAANQKLGIMAFVPADTTIVGVGENAGIRGGSLQIKGVR
NVILRNLTIEAPLDCFPAWDPTDGATGAWNSEYDAVVVYGSQHVWVDHNTLTDGRYPDST
LPSYFGEIYQQHDGLLDIVRGADLVTASWNVLRDHDKTLMIGNSDSAGADDRGKLRVTLH
HNHFDGVVERAPRVRFGKVDAYNNHFTVTPGQKYGYSFGIGIESQLVAEKNSFSLPPSVR
TGAVLKKWKEAPLTATGNYVNGAPTDLIAVHNAQYPAEQLASGAGWTPELRTKVNDPRAL
PGLVTRKAGAGKVC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagaacctcaacatgtcatgggcgcgtcattgccatgctggccggctgcaccgtcctc
gtcctcgccgccaccggaaccgcccaggccgccgcgcaccaccggcccgaccccacccgt
cagaccctcgccgcgcaggacggctgggcctccgagggcaccggcaccaccggcggctcg
gccgccgacgccgaccacgtcttcaccgtgaccacctgggcagagttcaaggccgcgctc
accgccgccgcgggtgcgccttcgatcatcaggatcaagggcgtcatcgacgccacatcc
gagggctgcgcctccttcgaggcacccggctacgacttcgaccggtacctcgccgactac
gatccggcggtctggggcatggacaaggagcccgccggggagcaggaggacctgcgggcc
gcgtcggcggcgaaccagaagctgggcatcatggcgttcgtccccgctgacacgaccatc
gtgggcgtgggcgagaacgccggtatcaggggcggcagtctccagatcaagggcgtgcgc
aacgtcatcctgcgcaacctcaccatcgaggccccgctggactgcttccccgcctgggac
ccgaccgacggtgccaccggtgcctggaactccgagtacgacgcggtcgtcgtgtacggc
tcccagcacgtctgggtcgaccacaacaccctgaccgacggccgctacccggactccacc
ctcccctcgtacttcggcgagatctaccagcagcacgacggtctcctggacatcgtccgc
ggcgccgacctggtcaccgcctcgtggaacgtcctgcgcgaccacgacaagaccctcatg
atcggcaacagcgacagcgcgggcgccgacgaccggggcaagctgcgcgtcaccctccac
cacaaccacttcgacggcgtcgtcgagcgtgccccgcgcgtccgcttcggcaaggtcgac
gcgtacaacaaccacttcaccgtcaccccgggccagaagtacggctactccttcggcatc
ggcatcgagtcccagctcgtggcggagaagaactccttctccctgccgccgtcggtgcgg
acgggcgcggtcctcaagaagtggaaggaggcacccctgacggccaccggcaactacgtc
aacggcgcccccaccgacctgatcgccgtccacaacgcgcagtacccggccgagcagctg
gcgtccggcgcgggctggacccccgagctccgcaccaaggtcaacgacccgcgcgcactc
cccggcctcgtcaccaggaaggccggcgcgggcaaggtctgctga
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