Streptomyces finlayi: F0344_29210
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Entry
F0344_29210 CDS
T09573
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy03030
DNA replication
sfiy03430
Mismatch repair
sfiy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0344_29210
03430 Mismatch repair
F0344_29210
03440 Homologous recombination
F0344_29210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfiy03032
]
F0344_29210
03400 DNA repair and recombination proteins [BR:
sfiy03400
]
F0344_29210
Enzymes [BR:
sfiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0344_29210
DNA replication proteins [BR:
sfiy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F0344_29210
DNA repair and recombination proteins [BR:
sfiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F0344_29210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QNE78136
UniProt:
A0A7G7BS21
LinkDB
All DBs
Position
complement(6361306..6362286)
Genome browser
AA seq
326 aa
AA seq
DB search
MTMLDDRQTAAPWPTAYPQGYAVVDVETTGLARDDRIVSAAVYRLDAQGNVEDHWYTLVN
PERDPGPVWIHGLTSDVLEGAPLFPEVAAQLSERLADRVLVAHNAAFDWSMIAREYARAS
AVAPVEQRLCTIALSKELRLPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSLH
AAALGGVRLPLLECRPLTEWSDSPVTPRIGYQASHGQNSWRASRKLPACPYPNPGRYEKE
KPLMQGMRVAFSGDTSIDRELLEDRAVEAGLHVASGVSRLTSLLVTNDPDAATSKTVKAK
SFGTPILEESAFTHLLRDVAPAPSSE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgctcgacgaccgtcagaccgcagcgccgtggccgaccgcctacccccagggg
tacgcggtcgtcgacgtggagaccaccggactcgcccgcgacgaccggatagtgtcggct
gccgtctaccggctcgacgcccagggcaatgtggaggatcactggtacacactggtcaac
cccgagcgggacccgggtcccgtctggatccacgggctgaccagcgacgtactggaaggc
gccccgctcttcccggaggtggccgcgcagttgtccgagcggctcgcggaccgggtgctc
gtcgcgcacaacgcggcattcgactggtcgatgatcgcccgtgagtacgcacgggcctcc
gccgtcgctcctgtggaacagcgcctgtgcaccatcgccctctccaaggagctgcggctg
ccgctgcccaaccacaagctggagtcgctggccgcgcacttcggcgtggtgcagcagcgc
gcgcaccacgcgctcgacgacgcccgggtgctggccgaggcgttccggccgagtctgcac
gccgcggcgctcggcggggtgcggctgcctctgctggagtgccggccactgaccgagtgg
tccgactccccggtcaccccccggatcggatatcaggcttcgcacggtcagaacagctgg
cgtgcctcgcgcaagctcccggcgtgcccgtatccgaatccggggcggtacgagaaggag
aagcccctcatgcagggcatgcgggtggccttctccggggacacctcgatcgaccgtgag
ctgctggaggaccgcgccgtggaggccgggctgcacgtggcgagcggcgtctcgcggctg
accagcctgctcgtcaccaacgacccggacgccgcgacgtcgaagacggtgaaggcgaag
tcgttcgggacgccgatcctggaggagagcgccttcacccatctgctgagggacgtggcg
cccgcgccgtcatcggagtga
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