Entry |
|
Symbol |
sbcD
|
Name |
(GenBank) exonuclease subunit SbcD
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
sfiy Streptomyces finlayi
|
Brite |
KEGG Orthology (KO) [BR:sfiy00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sfiy03400]
F0344_31905 (sbcD)
DNA repair and recombination proteins [BR:sfiy03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0344_31905 (sbcD)
Archaeal homologous recombinant proteins
F0344_31905 (sbcD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6933317..6934483
|
AA seq |
388 aa
MRILHTSDWHLGRSFHRVPMLDAQRTFLDHLVATVRERGADAVLVSGDIYDRAVPPLSAV
ELFDDALHRLAAENVPTIMISGNHDSARRLGVGAGLIGRAGIHLRTDPEGCGTPVVLRDA
RGEVAFYGLPYLEPALVKDALGAAKAGHEAVLGAAMDRVRADLATRPAGTRSVVLAHAFV
AGGEPSDSERDITVGGVAAVPAAVFDGVDYVALGHLHGSQRVTERVRYSGSPLAYSFSEA
DHRKTMWLADLDAEGSVTAERVDCPVPRPLARLRGPLTTLLDDPRHERHRESWVEATLTD
PARPDDPMARLVERFPHTLSLVFDPERAPEDPSASYAQRLEGRDDHQIAEDFVAHVRGGS
GPDEQERTVLRSAFDDVRVDDGVHEVSR |
NT seq |
1167 nt +upstreamnt +downstreamnt
gtgaggattctgcacacgtccgactggcatctggggcgctcattccaccgggtcccgatg
ctcgacgcgcagcggaccttcctcgatcacctggtcgccacggtccgcgagcgcggggcg
gacgccgtcctggtgtccggagacatctacgaccgggccgtgccgcccctgtccgccgtc
gagctgttcgacgacgcgctgcaccggctcgccgccgagaacgtgccgaccatcatgatc
tccgggaaccatgactcggcccgcaggctgggcgtcggcgcgggtctgatcggtcgggcc
ggcatccacctgcgtaccgacccggagggctgcggcacccctgtcgtcctgcgcgacgca
cgcggcgaagtggctttctacgggctgccctatctggaacccgccctggtcaaggacgcc
ctcggtgctgcgaaggcgggccacgaagccgtcctcggggccgcgatggaccgcgtccgc
gccgacctcgcgacccggcccgccgggacccggtcggtggtcctcgcccatgccttcgtc
gcgggcggcgagcccagcgacagcgaacgggacatcactgtcggcggagtcgccgccgtg
cccgccgcagtgttcgacggcgtcgactacgtggccctgggacatctgcacggcagccag
cgcgtcaccgagcgcgtgcgctactccggatccccgctcgcctactccttctccgaggcg
gatcaccgcaagaccatgtggctggccgacctcgacgccgaaggctccgtcaccgccgaa
cgggtcgactgtcccgtgccccgccccctcgcccggctccgcggccccctcaccaccctg
ctcgacgacccccgtcacgaacggcaccgggagtcctgggtcgaggccaccctgaccgac
ccggcgcgcccggacgacccgatggcccgcctcgtggagcgcttcccgcacaccctcagc
ctggtcttcgacccggaacgggcccccgaggatccctccgcctcgtacgcacagcgtctc
gagggacgcgacgaccaccagatcgcggaggacttcgtggcccatgtgcgcggcggcagc
ggaccggacgaacaggagcgcacggtgctgcgctccgccttcgacgacgtacgagtggac
gacggcgtgcacgaggtgtcccgttga |