Serratia ficaria: SAMEA4384070_0012
Help
Entry
SAMEA4384070_0012 CDS
T06444
Symbol
dgoD
Name
(GenBank) D-galactonate dehydratase
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
sfj
Serratia ficaria
Pathway
sfj00052
Galactose metabolism
sfj01100
Metabolic pathways
sfj01120
Microbial metabolism in diverse environments
Module
sfj_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SAMEA4384070_0012 (dgoD)
Enzymes [BR:
sfj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
SAMEA4384070_0012 (dgoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
SNV78270
UniProt:
A0A240A540
LinkDB
All DBs
Position
1:12253..13401
Genome browser
AA seq
382 aa
AA seq
DB search
MKITKLTTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARSVEAAVHELAEYVVGQDPARI
NDIWQTLYRGGFYRGGPILMSAIAGIDQALWDIKGKALGVPVYQLLGGLVRDKIKAYSWV
GGDRPADVISGINTLTEIGFDTFKLNGCEEMGIIDSARKVDAAVAVVAQIREAFGNRIEF
GLDFHGRVDAPMAKILIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTHIPIAAGERMYSR
FDFKRVLADGGLAIIQPDLSHAGGITECFKIAAMAESYDVALAPHCPLGPIALAACLHVD
FVARNAVFQEQSMGIHYNQGAELLDYVVNKDDFKMTDGHFYPLTKPGLGVEIDEELVIAR
SKQAPDWRNPVWRYPDGAVAEW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaccaaactgaccacctaccggctgccgccgcgctggatgttcctgaaaatc
gaaaccgacgagggcgtcgtcggctggggcgagccggtgatcgaggggcgggcgcgcagc
gtggaggcggcggtgcacgagctggcggaatatgtggtcgggcaggatccggcgcgcatc
aacgacatctggcaaaccctgtatcgcggcggtttctaccgcggcggcccgatcctgatg
agcgccatcgccggcatcgatcaggcgctgtgggacatcaagggcaaagcgttgggcgtg
ccggtgtatcagctgctcggcgggctggtgcgcgacaaaatcaaggcctatagctgggta
ggcggcgatcgtcccgccgacgttatttccggcatcaacacgctgacggaaatcggcttc
gataccttcaaactgaacggctgcgaagaaatgggcatcatcgacagcgcgcgcaaagtg
gatgcggcggtggcggtggtggcgcagatccgcgaggcgttcggcaaccgcattgagttt
ggcctggatttccacggccgcgtcgacgcgccgatggcgaaaatcctgatcaaggagctg
gagccgtaccgtccgctgtttatcgaagagccggtgctggccgagcaggcggaatattat
ccgcgtctggcggcgcagacccatataccgatcgccgccggcgaacgcatgtattcgcgc
ttcgacttcaaacgggtgctggcggacggcggcctggcgattattcagccggatctgtcc
catgcgggcggcatcaccgaatgcttcaagatagccgcgatggcggaatcttacgacgtg
gcgttggccccgcactgcccgctggggccgattgcgctggccgcctgcctgcatgtggac
ttcgtggcgcgcaatgcggtgttccaggagcaaagcatgggcattcactataaccagggc
gccgagctgctggactatgtggtgaataaagacgacttcaaaatgaccgacggccacttt
tatccgctcaccaagccgggtctgggggtggaaatcgacgaagagctggtgatcgcgcgc
agcaagcaggcgccggactggcgtaatccggtgtggcgttatccggacggcgccgtcgct
gagtggtaa
DBGET
integrated database retrieval system