Serratia ficaria: SAMEA4384070_0056
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Entry
SAMEA4384070_0056 CDS
T06444
Symbol
selB
Name
(GenBank) SelB translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sfj03012
]
SAMEA4384070_0056 (selB)
Translation factors [BR:
sfj03012
]
Eukaryotic type
Elongation factors
SAMEA4384070_0056 (selB)
Prokaryotic type
SAMEA4384070_0056 (selB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
GTP_EFTU
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_2nd_SelB
WHD_3rd_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
SNV79031
UniProt:
A0A240A6H8
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All DBs
Position
1:63396..65237
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AA seq
613 aa
AA seq
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MIIATAGHVDHGKTTLLQAISGINADRLPEEKRRGMTLDLGYAYWPQPDGRVLGFIDVPG
HEKFLANMLAGVGGIDHALLVVACDDGVMAQTREHLAILRLSGRPALTVALTKADRVEAT
RIDEVRRQVNDELARQGWPGAPLFVTAAAEGRGIAALREHLLALRPGEHGVTRRFRLAVD
RAFSVKGAGLVVTGTALGGRVAVGDTLWLTGADTPVRVRGLHAQNQAVERAQAGQRIALN
LSGDVGKEQITRGDWLLAQRPPQSAERILVALEADAPIRHWQPLHLHHAASHITGRLSLL
NGGLAELILDRPLWLAENDRLVLRDIGARQTLGAARVLRLAAPKRGKRQPEFLAWLQALA
QAADDAQALRLLLPQGPLSLAAFAWARQLTDAGLAELLSEPPLLVVGDHGLALDNVRQAE
SRLLQVLAEYHQQHADQLGLGRARLRRMALPALDEALVFMMIDRLLKAGALRNTRGWLHL
PEHGLAFSAEEAPLWQRIEPLFGDQAWWVRDLAAELGADEARVRALLRKAAQLGHVTAVV
VDRYYLSRRIEQFAALIRQLDAEQGSANAADFRDRLGVGRKLAIQVLEFFDRSGFTRRKG
NQHLLRDRGLFGG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgccaccgccggccacgtcgatcacggcaaaaccaccctgctgcaggcgatc
tcggggatcaacgcggatcgtctgccggaggagaagcgccgcggcatgaccctcgatctg
ggctacgcctattggccgcagcccgacggccgggtattgggctttatcgacgtgcccggc
cacgagaagtttctcgccaatatgctggcgggcgtcggcggcatcgaccatgcgctgctg
gtggtggcctgcgacgacggcgtgatggcgcagacccgcgaacatctggcgatcctgcgg
ttgagcggccgcccggcgctgacggtggccctgaccaaggcggaccgggtggaggcgacg
cgcatcgacgaagtgcgccggcaggtaaatgacgagctggcccgccaggggtggcccggg
gcgccgctgtttgtcaccgccgccgccgaggggcgcggcattgccgcgctgcgcgagcat
ctgctggcgctgcggcccggcgaacatggggtgacgcgccggtttcgcctggcggtggac
cgcgccttcagcgtcaagggcgccgggctggtggtgaccggcaccgcgctcggcggccgg
gtggcggtgggcgatacgctgtggctgaccggcgcggatacgccggtgcgggtgcgcggc
ctgcacgcccagaatcaggcggtcgagcgagcgcaggccggtcaacgcatagcgctgaac
ctcagcggcgacgtcggcaaagaacagattacccgcggtgactggctgctggcgcagcgg
ccgccgcagtcggcagaacgcattctggtcgcgctggaagccgatgcgccgatccgccat
tggcagccgctgcatctgcatcatgccgccagccacattaccgggcggctctcactattg
aacggcggcctggcggagctgatcctcgatcgtccgctgtggctggcggaaaacgatcgg
ctggtgctgcgcgatatcggcgcgcgccagacgctgggcgccgcccgggtgctgcgcctg
gcggcgccaaagcgcggcaagcggcagccggagtttctggcctggctgcaggcgctggcg
caggccgcggacgatgcccaggcgctgcggctgctgctgccccaggggccgctgtcgctg
gcggcgttcgcctgggcgcgccagctgaccgacgccgggctggctgaattgctgtcggag
ccgccgctgctggtggtcggtgaccatgggctggcgctggacaacgtgcggcaggccgaa
agccgcctgctgcaggtgctggcggagtaccatcaacagcacgccgatcagctggggttg
gggcgtgcgcgtctgcggcgcatggcgctgccggcgctggacgaggcgctggtgtttatg
atgatcgataggctgctgaaggccggtgcgctgcgcaatacgcgcggctggctgcatctg
ccggagcatggcctggcgttcagcgccgaagaagcgccgctgtggcagcggattgaaccg
ctgttcggcgaccaggcctggtgggtgcgcgatctggccgccgaactgggcgcggacgag
gcgcgggtgcgggcgctgctgcgcaaggcggcccagctgggccacgtcaccgcggtggtg
gtggatcgttactacctcagccgccgcatcgaacagttcgccgcgctgatccgccagctc
gacgcggagcagggcagcgccaacgccgccgacttccgcgatcggctcggcgtcggccgc
aagctggcgatccaggtgctggagttcttcgaccgcagcggctttacccgccgcaagggc
aaccagcacctgctgcgcgatcgcgggctgtttggcggttga
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