Serratia ficaria: SAMEA4384070_0117
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Entry
SAMEA4384070_0117 CDS
T06444
Symbol
yhjK
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SAMEA4384070_0117 (yhjK)
Enzymes [BR:
sfj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SAMEA4384070_0117 (yhjK)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
SNV80139
UniProt:
A0A240AA32
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All DBs
Position
1:134537..136543
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AA seq
668 aa
AA seq
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MRVRRSLTIKQMATVSGVALVTICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRQPLAEA
VLRMDVPETKRVLNQLLPVGILTRADIVLPNEFQALHANFPPERPVPTPIARLFELPIQI
SVPLYSLERVPANPQPLAYLVLQADSFRMYQFILSMLSTMLSTYLLLALILSISITWCMN
RLMVHPLRAIAKELEDISQEEAPYHQLRLPALHQDDELGLLVRNYNRNQQTLAKAHADMS
RLSTRHPVTDLPNQALFTALLEQHIASSLRPERFNLLVVGIETLHEASGVLSPAMRETLL
LALAKKLRGCVDENGVLAQLSNTEFAILAKGVERPFHAMQLARRIMAEINAPLSLEGLAL
RPNASVGIAHYLHQEQSAEQLLRSATSAMMSAHREGKNQIRFFEPSLTERTQKRLTQESE
ILHAIEQRHFTLFLQPQLDMASGAVIGAEALLRWQQYDGSFTLPADVIPLAEELGVIVPL
GNWVLEESCRILADWQRQGIQLPLAVNISGIQMQHEGFVPHLKSILAQYRIDPRKLLLEI
TETVRIDDLDRALTLLRELHGLGLSIALDDFGMGYSSLEYLNRLKSLPIDLIKIDKSFIQ
GLPNDDAMARIVSAISEVLNLPVMAEGVENAAQRDWLLEHGIRSGQGFLFARPLPREAFE
AQFCRAAD
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtcaggcgttcattaacgattaaacagatggcgacggtgtccggcgtggcgctg
gtgactatctgcatatttatcgtgattcagttattccattttgtgcagcagcgcagggat
gactacgcccagcaactggaaaatatcgctcattcggtgcggcagccgctggcggaagcc
gtattgcgcatggacgtgccggaaaccaaaagggtgctgaatcaactgctgccggtgggg
atcctcacccgcgcggatatcgtgctgcccaacgagtttcaggcgctgcacgccaatttc
ccgccggaacgcccggtgccgacgccgatcgcccggctgttcgagctgccgatccagatt
tccgtcccgctctattcgctggaacgggtgccggccaatccgcagccgctggcttatctg
gtgctgcaggccgattcgttccgcatgtaccagtttatcctcagcatgctgtcgaccatg
ctctcgacctacctgctgctggcgctgatcctgtcgatatccatcacctggtgcatgaac
cggctgatggtgcatccgctgcgcgcgatagccaaagagctggaagacatttcgcaggag
gaggcgccctatcatcagctgaggctgccggcgctgcatcaggacgacgagctcggcctg
ctggtgcgcaactacaaccgcaatcagcagacgctggccaaggcccatgccgacatgagc
cgcctcagcacccgccacccggtgaccgacctaccgaaccaggcgctgttcaccgccctg
ctggagcagcatatcgcctccagcctgcggccggagcgcttcaacctgctggtggtgggc
atcgagacgctgcatgaggcctccggcgtgctcagcccggcgatgcgcgaaaccttgctg
ctggcgctggcgaaaaaattgcgcggctgcgtcgatgaaaacggcgtgctggcgcagctg
agcaacaccgagttcgccattctggccaaaggggtcgagcgtcccttccacgccatgcag
ctggcgcggcgcatcatggcggagatcaacgcgccgttgagcctggaagggttggcgctg
cggccgaacgccagcgtcggcatcgcccactatctgcatcaggaacagagcgccgagcag
ctgctgcgcagcgccacctcggcgatgatgtccgcgcatcgcgaaggcaagaatcagatc
cggttttttgaacccagcctgacggaaagaacccagaagcggctgacgcaggaaagcgag
atcctgcacgccatcgagcagcgtcacttcacgctgttcctgcagccgcagctggacatg
gcgtccggcgcggtgatcggcgccgaggcgctgctgcgctggcagcagtatgacggcagc
ttcaccctgccggcagacgttatccccctggcggaagagctgggggtgatagtgccgctc
ggcaactgggtgcttgaggaatcctgccgcattctggcggactggcagcggcagggcatc
cagctgccgttggcggtcaatatctccggcatccagatgcagcacgagggctttgtgccg
cacctgaagagcatcctggcgcagtatcggatcgatccgcgcaagctgctgctggagatt
accgaaacggtacgcatcgacgatctcgatcgggcgctgaccttgctgcgcgaactgcac
ggcctggggctgtcgatcgccctggatgatttcggcatgggctattccagcctggaatac
ctgaaccggctgaaatccttgccgatcgatctgattaaaatcgataaaagctttattcag
ggattgccgaacgatgacgccatggcgcgcatcgtcagcgccatctccgaagtgctcaac
ctgccggtcatggccgagggcgtcgaaaatgccgcgcagcgcgactggctgctggaacat
ggcatccgcagcggccaggggttcctgtttgcgcgcccgctgccgcgcgaggcgtttgaa
gcccagttctgccgcgctgcggattga
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