Serratia ficaria: SAMEA4384070_0151
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Entry
SAMEA4384070_0151 CDS
T06444
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sfj
Serratia ficaria
Pathway
sfj00300
Lysine biosynthesis
sfj00470
D-Amino acid metabolism
sfj01100
Metabolic pathways
sfj01110
Biosynthesis of secondary metabolites
sfj01120
Microbial metabolism in diverse environments
sfj01230
Biosynthesis of amino acids
Module
sfj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMEA4384070_0151 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMEA4384070_0151 (dapF)
Enzymes [BR:
sfj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SAMEA4384070_0151 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
SNV80581
UniProt:
A0A240AAX5
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All DBs
Position
1:169690..170514
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHLGIGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRAAKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHDRFPERANIGFMQIVSREHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGSPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgagctgatccgcaggctgtccgatcggcacctgggcatc
ggctttgaccaactgctggtggtagaaccgccttacgatcccgagttggatttccactat
cgcatcttcaacgccgacggcagcgaggtggcgcagtgcggcaacggcgcgcgctgcttc
gcccgctttgtgcggctgaaagggctgaccaacaaacgcgacattcgcgtcagtacccaa
accgggcgcatggtgctcagcgtcaccgacgatgacctggtgtgcgtcaatatgggtgag
ccgaatttcgatccgcaggcggtgccgttccgcgccgccaaggcggagaagacgtacatc
atgcgcgccgccgaacataccgtgctgtgcggcgtggtgtcgatgggcaacccgcattgt
gttttacaggtagatgatgtaaaaaccgccaaggtagagctgcttggcccggtgctggaa
gggcacgatcgcttcccggagcgggccaacatcggctttatgcagatcgtcagccgcgag
catatcaagctgcgcgtctacgagcgcggcgccggcgagacgcaggcctgcggcagcggc
gcctgcgcggcggtggcggtgggcattcaacaggaattgctgtcagaagaggtgcatgta
gaactgccgggcggcagcctgcatattcgctggaaaggaccgggcagcccgctgtttatg
accggtccggcaacccatgtatatgacggatttattcacctatga
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