Serratia ficaria: SAMEA4384070_0162
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Entry
SAMEA4384070_0162 CDS
T06444
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sfj
Serratia ficaria
Pathway
sfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4384070_0162 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfj03019
]
SAMEA4384070_0162 (recQ)
03400 DNA repair and recombination proteins [BR:
sfj03400
]
SAMEA4384070_0162 (recQ)
Enzymes [BR:
sfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4384070_0162 (recQ)
Messenger RNA biogenesis [BR:
sfj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMEA4384070_0162 (recQ)
DNA repair and recombination proteins [BR:
sfj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4384070_0162 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
SNV80767
UniProt:
A0A240ABK7
LinkDB
All DBs
Position
1:180682..182526
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AA seq
614 aa
AA seq
DB search
MGKCVSTAAVINRELLAEQVLRDTFGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLC
YQIPALVMDGLTLVVSPLISLMKDQVDQLLAYGVSAACYNSTQSREQQLEVMAGCRSGQI
KMLYIAPERLMMDSFLDLLDHCPPAMLAVDEAHCISQWGHDFRPEYRALGQLKQRFPRMP
VIALTATADESTRGDIVRLLALQDPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRG
KSGIIYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCLEEKP
AGQQLDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGKHENCGNCDICLDPPKRYDGLEDA
RKALSCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGRDQTTEFWTSVLRQL
IHLGFITQNIAMHSALQLTEAARPVLRGEVALQLAVPRIQSLKPRSGANQKSYGGNYDRK
LFAKLRKLRKSIADEENIPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAP
FMAMIRDHLDNDED
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtgtgtgtcaaccgcagcagtgataaaccgagagttgctggcagagcaggta
ttacgcgataccttcggctaccagcagttccgtccgggccaacaaacgattatcaacgca
gcgatcggcgggcaggattgcctggtggtgatgccgaccggcggcggtaaatcgttgtgc
tatcaaatcccggcgctggtgatggatggcctgaccctggtggtttcccccttgatctcg
ctgatgaaggatcaggtcgatcagctgctggcctacggcgtttccgccgcctgctacaac
tcgacgcagagccgcgagcagcagctggaagtgatggcgggctgccgcagcggccagatc
aagatgctgtacatcgccccggaacggctgatgatggacagcttcctcgacctgctcgac
cactgtccgccggcgatgctggcggtggatgaggcgcactgcatttcgcaatggggccac
gatttccggccggaataccgcgccctgggccagctgaagcagcgtttccctcgcatgccg
gtgatcgccctgaccgccaccgccgacgaatccacccgcggcgacatcgtgcgcctgctg
gcgctgcaggatccgctggtgcaggtcagcagcttcgaccggccgaacatccgctatacc
ctggtggaaaaattcaaaccgctcgaccagctgtggcgcttcgtgcaggaccagcgcggc
aagagcggcattatttactgcaacagccgcgccaaggtggaagataccgcggcgcgtctg
caaagccgcgggctgagcgtaggcgcctatcacgccgggttggataacgaccggcgcgcg
caggtgcaggaagcgttccagcgcgacgatctgcaggtggtggtggctaccgtcgccttc
ggcatgggcatcaacaaacccaacgtgcggtttgtggtgcacttcgacatcccgcgcaat
atcgagtcctactatcaggaaaccggccgcgccgggcgcgacggcctgccggccgaagcc
atactgctgtacgacccggccgatatggcctggttgcgccgttgcctggaggagaagccc
gccgggcagcagctggatatcgaacgccacaagctgaacgccatgggcgccttcgccgag
gcgcaaacctgccgccggctggtgctgctcaactatttcggcgagggcaagcacgagaac
tgcggcaactgcgacatctgtctggatccgcccaagcgttatgacgggctggaggacgcg
cgcaaggcgctgtcctgcgtgtaccgcgtcgggcagcgtttcggcctgggttatatcgtc
gaggtgctgcgcggctccaataaccagcgcatccgcgaatacggccacgacaagctgccg
gtgtacggcatcggccgcgatcagaccaccgaattctggaccagcgtgctgcgccagctg
atccacctgggctttatcacccagaatatcgccatgcactcggcgctgcagctgaccgag
gcggcgcggccggtattgcgcggcgaagtggcgctgcagctggcggtgccgcgtatccag
agcctgaagccgcgcagcggcgccaaccagaaatcctacggcggcaattacgatcgcaag
ctgttcgccaagctgcgcaagctgcgtaaatcgatcgccgacgaagaaaacattccgcca
tacgtggtgttcaacgacgccacgctgctggaaatggccgaacagatgccgatcaaggcc
ggcgatctgctgagcgtcaacggcgtcggccagcgcaaactggagcgtttcggcgcgccc
tttatggcgatgatccgcgaccacctggacaatgatgaagactaa
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