Serratia ficaria: SAMEA4384070_0196
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Entry
SAMEA4384070_0196 CDS
T06444
Symbol
rpoH
Name
(GenBank) Heat shock regulatory protein F33.4
KO
K03089
RNA polymerase sigma-32 factor
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfj03021
]
SAMEA4384070_0196 (rpoH)
Transcription machinery [BR:
sfj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMEA4384070_0196 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
HTH_3
HTH_10
Motif
Other DBs
NCBI-ProteinID:
SNV81412
UniProt:
A0A240ADB2
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All DBs
Position
1:217492..218349
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AA seq
285 aa
AA seq
DB search
MTKEMQTLALVPQGSLEAYIRAANAYPMLTAEEERELAERLHYQGDLEAAKQLILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPDDEARDGQSMAPVLYLQDKSSDFAEGIEEDNWESNAADKLAYALEGLDERSQHI
IRARWLDDDNKSTLQELADRYGVSAERVRQLEKNAMKKLKMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagccttagtaccccaaggcagcttggaagcctatatt
cgggccgccaacgcctatccgatgctgacggcagaggaagagcgggagctggctgaacgg
ctgcattatcagggcgatctggaagcagctaagcagcttatcctgtctcacctgcgcttt
gtcgctcatattgcccgcaactattcaggctatggtctgccgcaggcggatctgatccag
gaaggtaacatcggcctgatgaaagccgttcgccgtttcaacccggaggttggcgtgcgt
ctggtgtcctttgcggtgcattggattaaggcggaaattcacgaatacgtgctgcgcaac
tggcgcatcgtcaaggttgccaccaccaaggcgcagcgcaaactgttctttaacctgcgc
aaaaccaagcagcgtctgggctggttcaatcaggacgaagtggaactggtggcccgcgag
ctgggggtgaccagcaaagacgtgcgcgagatggagtcccgcatggcggcgcaggacatg
acctttgacccgaccccggacgacgaagcccgtgacggtcagtcgatggcgccggtgctg
tatctgcaggataaaagctccgacttcgccgaaggcattgaggaagataactgggaaagc
aacgccgcggacaaactggcctatgcgctggaaggtctggacgaacgcagccagcatatc
atccgcgcccgctggctggacgacgacaacaaatccacgctgcaggaactggccgatcgg
tacggcgtttccgccgagcgcgtgcgtcagctggaaaagaacgccatgaagaagctgaag
atggcgatcgaagcctaa
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