Serratia ficaria: SAMEA4384070_0235
Help
Entry
SAMEA4384070_0235 CDS
T06444
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sfj
Serratia ficaria
Pathway
sfj00071
Fatty acid degradation
sfj00280
Valine, leucine and isoleucine degradation
sfj00310
Lysine degradation
sfj00362
Benzoate degradation
sfj00380
Tryptophan metabolism
sfj00410
beta-Alanine metabolism
sfj00640
Propanoate metabolism
sfj00650
Butanoate metabolism
sfj00907
Pinene, camphor and geraniol degradation
sfj00930
Caprolactam degradation
sfj01100
Metabolic pathways
sfj01110
Biosynthesis of secondary metabolites
sfj01120
Microbial metabolism in diverse environments
sfj01200
Carbon metabolism
sfj01212
Fatty acid metabolism
Module
sfj_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SAMEA4384070_0235 (fadB)
00650 Butanoate metabolism
SAMEA4384070_0235 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SAMEA4384070_0235 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SAMEA4384070_0235 (fadB)
00310 Lysine degradation
SAMEA4384070_0235 (fadB)
00380 Tryptophan metabolism
SAMEA4384070_0235 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SAMEA4384070_0235 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SAMEA4384070_0235 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SAMEA4384070_0235 (fadB)
00930 Caprolactam degradation
SAMEA4384070_0235 (fadB)
Enzymes [BR:
sfj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SAMEA4384070_0235 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SAMEA4384070_0235 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SAMEA4384070_0235 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SAMEA4384070_0235 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
SNV82104
UniProt:
A0A240AG64
LinkDB
All DBs
Position
1:complement(257188..259377)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNAPGSVNKLDTSTVASLGEALDALEKQTELKGLLLRSS
KAAFIVGADITEFLSLFAAPAEKLLEWLAFANSVFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETRLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLTDAALNMLQQAIDGKLDWRAARQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDAALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLARNVEAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISEKSLTLGMNEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVENLIGE
DTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDGTIAAVVAY
ATRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMNKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDNKGKP
RKDNDEQTDALLAEVSQPRQTVSDEEIIARMMIPMINEVVRCLEENIIASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYAELAQRYAHLGALYQVPAGLRAKAERNESYYPVAAPL
SDVATRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgacaacggcatcgccgagctg
gtgttcaacgcaccgggctcggtcaacaagctggataccagcaccgtcgccagcctgggc
gaagcgctagacgcgctggaaaagcagaccgagctgaaagggctgctgctgcggtccagc
aaggccgcctttatcgtcggcgccgatatcaccgagttcctgtcgctgtttgccgccccg
gccgaaaagctgctggaatggctggccttcgccaattccgtctttaaccggctggaagat
ttgccggtgccgaccatttcggcgattaacggctatgcgctcggcggcggttgcgaatgc
attctggcgaccgacttccgcgtcgcctcgccggacgcgcgcatcggcctgccggaaacc
aggctgggcatcatgccgggcttcggcggttcggttcgtctgccgcgcctgttgggcaac
gacagcgcgctggaaatcatcgccgccggtaaggacgtcagcgccaaagacgcgctgaaa
gtcggcctggtggatgcggttgtcgcaccggaaaaactgaccgatgcggcgttgaacatg
ctgcaacaggcgatcgacggcaaactggactggcgcgcggcccgtcagccgaagctggag
ccgctgaaactcagccccatcgaagcggcgatgagcttcaccaccgccaaaggcatggtg
ctgcaaaccgcaggcaaacactaccccgcgccgatgaccgcggtgaaaaccatcgaagcc
gctgcaaaattgggccgcgacgccgcattgaagctggaaaccgccagctttgtgccgttg
gcgcgctccaacgaagcgcgcgcgctggtcggcattttcctcaacgatcagttcgtgaag
ggtcaggcgaaaaagctggccaggaatgtggaagcgcccaagcaggccgccgtgttgggc
gccggcatcatgggcggcggcatcgcctaccagtccgcgctgaagggcgtgccggtgatc
atgaaggacatcagcgaaaaatcgctgacgctgggcatgaacgaagccgccaagttgctc
aataaacagctggagcgcggcaagctggacggcctgaaaatggctcaggtattgtcgacc
attcaacctacgctggactacgccggcatcgaacgcgcgcaggtcattgtcgaagcggtg
gtggaaaatccgaaggtaaaggccgccgtattgtctgaagtggaaaacctgatcggtgaa
gataccgttctggcctccaacacctcgaccattccgattaatcacctggcgaaatcgctg
aaacgcccgcagaacttctgcggcatgcacttctttaacccggtgcaccgcatgccgttg
gtcgaaatcatccgcggagagcaaaccagcgacggcactatcgccgcggttgtggcctac
gccacccgcatgggcaaaacgcctatcgtggtgaacgactgcccgggcttcttcgtcaac
cgcgtgctgttcccttacttcgccggcttcagcctgctgctgcgtgacggcgccgatttc
cgccagatcgacaaagtgatggaaaaacagttcggctggccgatgggccccgcctatctg
ctcgacgtggtgggcatcgataccgcgcaccacgcccaggcggtgatggcggccggtttc
ccggagcgcatgaacaaggactatcgcgacgccattgacgtgatgttcgacaaccagcgc
ttcggccagaagaaccaactgggcttctaccgctacagccaggacaacaagggcaaaccg
cgcaaagacaacgacgagcagaccgacgcgctgctggccgaagtgagccaaccgcgccag
accgtcagcgacgaagagatcatcgcccgcatgatgatcccgatgatcaacgaagtggtg
cgctgcctggaagaaaacattatcgccagcccggcggaggccgatatggcgttggtttac
ggcatcggtttcccgccgttccacggcggggcgttccgctacctggacacgctcggcacc
gccaactacgccgagctggcccagcgttatgcgcaccttggcgcgctgtatcaggtgcct
gccggcctgcgcgccaaagccgaacgtaacgaaagctactacccggtggctgcgccgctg
tccgacgtcgccacccgccaaccggcatga
DBGET
integrated database retrieval system
