Serratia ficaria: SAMEA4384070_0273
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Entry
SAMEA4384070_0273 CDS
T06444
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sfj
Serratia ficaria
Pathway
sfj00730
Thiamine metabolism
sfj01100
Metabolic pathways
sfj01240
Biosynthesis of cofactors
Module
sfj_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SAMEA4384070_0273 (thiC)
Enzymes [BR:
sfj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SAMEA4384070_0273 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
SNV82819
UniProt:
A0A240AHS2
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All DBs
Position
1:complement(297006..298949)
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AA seq
647 aa
AA seq
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MSNVKKPRARKEQREAAQQFIDSLQGVAFPSSRRIYLQGSRSDVQVPMREIQLSPTLVGG
GKDNPQYEQNEAIPVYDTAGPYGDPQARLDVHAGLARLRAGWIEERGDTAVLSGVSSGFT
QQRLADEGLDHLRFERLPLPRKAQPGKCVTQLHYARAGIVTPEMEFIAIRENMGRQRIRG
EVLRQQHPGQSWGANLPDNITAEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTARRLTGIVSRGGSI
MAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKIAHFCSMCGPKFCSMKISQEVR
DYAAAQEAAKPIEVQLNGMEKMSAEFRSRGSELYHSAGNLQEEMRND
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgttaagaaacctcgtgcccgtaaagagcaacgcgaagctgcccaacagttt
atcgacagcctgcagggggtggccttccccagctcacgccgtatctatctgcagggttcg
cgcagcgatgtgcaggtgccgatgcgcgaaattcagctcagcccgacgctggtcggcggc
ggcaaggacaacccgcagtacgaacagaacgaagccatcccggtgtacgacaccgccggc
ccctacggcgatccgcaggcgcggctcgacgtgcatgccggcctggccaggctgcgcgcc
ggctggatcgaagaacgcggcgataccgcggtactgagcggcgtcagttccggtttcacc
cagcagcgcctggcggatgaaggcttggatcacctgcgcttcgaacgcctgccgctgccg
cgcaaggcgcaaccgggcaagtgcgtgacccagttgcactacgcccgcgccggcatcgtc
accccggagatggagtttatcgccatccgtgaaaacatggggcgccagcgcatccgcggc
gaggtcctgcgccagcagcatccgggccaaagctggggcgccaacctgccggacaacatc
acggcggaattcgtgcgccaggaagtggccgccgggcgcgccatcatccccgccaacatc
aaccacccggaatccgaaccgatgatcatcggccgcaacttcctggtgaaggtcaacgcc
aacatcggcaactcggcggtgacctcctcgatcgaagaggaagtggaaaagctggtgtgg
tccacccgctggggcgcggataccgtgatggacctgtcgaccggccgctatatccacgaa
acccgcgaatggatcctgcgcaacagcccggtgcccatcggcacggtgcctatctaccag
gcgctggagaaggtcaacggcgtggcggagaacctgacctgggaaatgttccgcgatacc
ctgctggaacaggcggaacaaggggtggactacttcaccattcacgccggcgtgctgctg
cgctatgtgccgatgaccgccaggcgcctgaccggcatcgtctcgcgcggcggctcgatc
atggccaagtggtgcctgtcgcaccatcaggaaaacttcctgtatcagcacttccgcgaa
atctgcgagatctgcgccgcctatgacgtttcgctgtcgctcggcgacggcctgcgccca
ggctcgattcaggacgccaacgacgaagcgcagttcgccgagctgcacaccctgggcgaa
ctgaccaagatcgcctgggaatacgacgtgcaggtgatgatcgaaggccccggccacgtg
ccgatgcagatgatccgccgcaatatgaccgaagagctggagcactgccacgaagcgccg
ttctataccctcggcccgctgaccaccgatatcgcaccgggttatgaccacttcacctcc
ggcatcggcgcggcgatgatcggctggttcggctgcgccatgctgtgttacgtcacgccg
aaggagcatctcggcctgccgaacaaggaagacgtcaaacagggattgatcacctacaag
atcgccgcccacgccgccgatctggccaagggccacccgggcgcgcagatccgcgacaac
gccatgtccaaggcgcgcttcgagttccgctgggaagatcagttcaacctggcgctcgat
ccggctaccgcgcgcgcctaccacgacgaaaccctgccgcaggagtccggcaaaatcgca
cacttctgctcgatgtgcggaccgaaattctgctcgatgaaaatctcgcaggaggtgcgc
gactacgccgccgcccaggaggccgccaaaccgatagaggtgcagctgaacggcatggaa
aagatgtcggccgaattccgttcgcgcggcagcgagctctaccacagcgccggcaacctg
caagaggaaatgcgcaatgactga
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