Serratia ficaria: SAMEA4384070_0342
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Entry
SAMEA4384070_0342 CDS
T06444
Symbol
topB_1
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfj03032
]
SAMEA4384070_0342 (topB_1)
Enzymes [BR:
sfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SAMEA4384070_0342 (topB_1)
DNA replication proteins [BR:
sfj03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA4384070_0342 (topB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
SNV83727
UniProt:
A0A240AK04
LinkDB
All DBs
Position
1:379799..381838
Genome browser
AA seq
679 aa
AA seq
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MQLYLCEKPSQGKDIGAVLGATQRKQGYLTGAGVIVTWAIGHLLEQAQPETYGEQYGSPW
RESVLPIVPAQWKMMVKKDTADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHF
TGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLARSRADWMTGMNLTRLYTLKAR
EQGYGEVLSIGRVQTPTLALVVNRDRDIANFISKPYWQVRATLQKGGIAFPANWVPAVNY
CDEEKRCIQQNVAQAVVQLCQQTANAVVLEVGTERKKESAPLAFDLGTLQQACSRKWGMS
ANQVLSIAQSLYETHKATTYPRTDCGYLPTSMREEVADVLSAVTRTDPTQSESVARLDRT
FVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLIRQHYLAQFLPLHEVDVTEAT
FNIGGQLFRTRGKVEVVAGWKALFQHDASEAKEEPADTDDVRLPALVKGETVSVAGAELK
TLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILETLFKRGYL
EKKGKYLLSTPIAGELIDALPTALINPGMTALWEQALDEIAQGQMTLDTFMSRQAQWTGH
LVEKGKAQAVKFTAPPSPPCPTCSGTMRRRAGKKGGGAFWGCSNYPTCQGIINIDAKGGR
KAKRYKAKSPAKNKTTKSE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcaactctacctgtgcgagaaacctagccagggtaaagatatcggcgccgttcttggg
gcgacgcagcgtaagcagggttacctgacgggcgccggtgtcatcgttacctgggctatc
gggcacctgttggagcaggcccagccggagacctacggcgagcagtatggcagcccttgg
cgagagtccgtactgcctatcgtccctgcccagtggaaaatgatggtaaaaaaagacact
gccgatcagttcgctgtcattcgtgggttgctcaaacaggttgattctgtggtgattgcg
accgatgcggatcgcgagggcgaagtgatcgcgcgggagttactggagcattgccacttt
accggcccggtccagcggctctggttgtcagcgctggacgaggccagtattcggcatgcc
ctggcgaacaagctccctggcgagaagacagcgcccctgtatgaagccggcctggcgcga
tcacgggctgactggatgacggggatgaatttaacccggctttacacgctcaaagcccgt
gagcagggatatggcgaggtattgtcgatcgggcgggtgcagacccccacgctggcgttg
gtcgtgaaccgtgaccgcgacattgccaatttcatctcgaaaccctactggcaagtcagg
gcgacactgcagaaaggcggcatcgccttcccggcaaactgggtacctgctgtcaactac
tgtgatgaagagaagcgctgtattcaacaaaatgtggcgcaggccgtcgtgcagctgtgt
cagcaaacggctaatgccgttgtgcttgaggtggggaccgagcgcaagaaagagtccgcg
ccattggcatttgacctgggcaccctgcagcaggcttgctcacgcaagtgggggatgagc
gccaaccaggtcttgagtatcgcacagtcactgtatgaaacgcacaaggccaccacgtat
ccacgcacggattgcggctatctgccgacatcgatgcgggaagaggttgccgacgtgctg
agtgccgttacccgtacggacccaacgcagagcgaaagcgtggcgaggctcgacaggact
tttgtttcccgtatctggaacgacaaaaaaatcacggcgcaccacgggattatcccaacc
aaacagccgttcgacctgagcaagttgtctgccgacgagctcaaggtctatcagctgatc
cgtcagcattacctggcacagttcctgcccttacatgaagtggatgtgacggaggccacc
ttcaatatcggtggccaactgttccgcacccgcggcaaagttgaggtggttgccgggtgg
aaagcactgttccagcatgacgcgagcgaggcgaaagaggaaccggctgacacagatgat
gttcgtctgcctgccctggtaaaaggtgaaaccgtctcggttgccggcgctgagctcaaa
acgctgcagacgaagcctccgggacatttcaccgacgggaccttgatcgccgcaatgaaa
aatgcagcggcgttcgtcagtgacccgcaactgaagaaggtgttgaaagagaacgcgggg
ctgggtactgaagcgacgcgcgccggtatcctggaaacgctgtttaaacgcgggtacctg
gagaagaagggtaaatatctgctctccacgccgatcgccggcgaactgattgatgcgtta
ccgactgcgctgatcaacccagggatgacggcgttgtgggagcaggcgctggacgagatt
gcccagggccagatgacactcgatacgttcatgagccgccaggcacagtggacggggcac
ctggtagagaaagggaaggcgcaagccgtgaaatttactgcgccaccttcgccaccttgc
ccgacatgcagcgggacaatgcgccggcgtgccggtaagaaaggcggtggagccttctgg
ggctgcagtaattaccccacttgccagggcatcattaacatcgatgcaaaaggtgggcgc
aaggctaagcgctataaagcaaaatcaccggccaaaaataaaacaaccaaatcagagtaa
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