Serratia ficaria: SAMEA4384070_0557
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Entry
SAMEA4384070_0557 CDS
T06444
Symbol
treR
Name
(GenBank) Trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_0557 (treR)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA4384070_0557 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_IclR
HTH_31
HTH_23
HTH_7
Peripla_BP_4
MarR_2
HTH_Tnp_ISL3
MarR
SpoIIID
HTH_Crp_2
CENP-B_N
HHH
HTH_26
TrmB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
SNV86129
UniProt:
A0A240ASB2
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All DBs
Position
1:complement(600794..601741)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLLYQQGFDPIVMESQFETRLVQEHLHVLQQRNVD
GVILFGFTGLSAAMLSPWQEKMVVMVREYDGFSSVCYDDAGAVNLLMDRLHKQGHRHISY
LGVQLSDATTGQRRYQAYLAACERLQLAPRAALGELNYQSGFQRAAEVIDPQTSALICAS
DSIALGAIKYLQQQPAQRIQVCAIGNTPLLSFLFPDTLSVEFGYGSAGLQAAQQLLAQLS
GEQGIRRIVVPSKLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaggacatcgcacgcctgagcggcgtaggaaaatccacc
gtatcgcgcgtgttgaacaacgaaggcagcgtgagcccgcagacccgcgaacgggtggaa
gcggtgatccgtcagcaggggtttaccccctccaagtcggcgcgcgccatgcgcggccaa
agcgacaaggtggtgggcattatcgtttcgcgcctcgattcgccgtcggaaaaccaggcg
gtgcgcaccatgctgccgctgctgtatcagcagggcttcgacccgatcgtgatggagagc
cagttcgaaacccgcctggtgcaggaacacctgcacgtgctgcagcagcgcaacgtcgac
ggggtgatcctgttcggcttcaccgggctgagcgcggcgatgctcagcccctggcaggaa
aaaatggtggtgatggtgcgcgagtacgacggcttttcttccgtttgctacgacgacgcc
ggcgcggtcaacctgctgatggaccgcctgcataaacaggggcatcgacatatcagctac
ctcggcgtgcagctgagcgacgccaccaccggccagcgccgctatcaggcctatctcgcc
gcctgcgagcgcctgcagctggcgccgcgcgcggccctgggcgaactgaattaccagagc
ggcttccagcgcgccgccgaggtgatcgacccgcaaaccagcgcgctgatctgcgcctcc
gacagcatcgccctgggcgccatcaaatacctgcagcagcagcctgcgcagcgcattcag
gtgtgcgccatcggcaacaccccgctgctcagcttcctgttccccgacaccctgtcggtc
gaattcggctacggcagcgccggcttgcaggcggcgcaacagctgctggctcagctcagc
ggcgagcaaggcattcggcgcattgtggtgcccagcaaactttcctga
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