Serratia ficaria: SAMEA4384070_0574
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Entry
SAMEA4384070_0574 CDS
T06444
Symbol
valS
Name
(GenBank) Valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sfj
Serratia ficaria
Pathway
sfj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4384070_0574 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfj01007
]
SAMEA4384070_0574 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfj03016
]
SAMEA4384070_0574 (valS)
Enzymes [BR:
sfj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SAMEA4384070_0574 (valS)
Amino acid related enzymes [BR:
sfj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SAMEA4384070_0574 (valS)
Transfer RNA biogenesis [BR:
sfj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAMEA4384070_0574 (valS)
Prokaryotic type
SAMEA4384070_0574 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1f
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
SNV86298
UniProt:
A0A240ATV6
LinkDB
All DBs
Position
1:complement(620758..623634)
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AA seq
958 aa
AA seq
DB search
MEKTNSQLDTAYDPKQIEQKLYDHWEGQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHA
FQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIEK
IWQWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVREVFVRLHKEDLIYRGKRLV
NWDPKLRTAISDLEVENRESKGSMWHLRYPLADGAKTAEGKDYLVVATTRPETVLGDTGV
AVNPEDPRYKDLIGKEIVLPLVGRRIRIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRH
GLPMINILTFDGDIRQEAEVFNTLGEVCADYCSEIPAEFRGLERFAARKAVVAAFEQLGL
LAEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRTAPLAKVAVEAVEQGEIQFVPKQYENMY
FSWMRDIQDWCISRQLWWGHRIPAWYDVNGKVYVGRSEEEVRSENNLGADVALTQDEDVL
DTWFSSGLWTFSTLGWPEQTEALKTFHPTSVMVSGFDIIFFWIARMIMLTMHFIKDENGK
PQVPFKTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEK
IRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVL
MNTEEHDCGFNGGDKVLSLADRWILAEFNRTVKAYREALDTYRFDLAANILYEFTWNQFC
DWYLELTKPVVSNGSEAEQRGTRHTLITVLEALLRLAHPIIPFITETIWQRVKPLTGSAA
DTIMLQPFPAYDAALEDEQALNDLEWIKQAITAVRNIRAEMNIAPSKQLDVLLRNCSADA
QRRLQENQSFIARLARLSSIAPLPAGEKGPVSVTKLVDGAELLIPMAGFIDKDAEIARLA
KEMGKLDAEIAAIEGKLANEGFVARAPEAVVAKERDRLAACKEGKVKLQEQQATIAAL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacaaacagtcagctcgacaccgcatacgacccaaaacagatcgaacagaag
ctgtacgatcactgggaaggccagggttacttcaagccgaacggcgacaccagccaggaa
agcttctgcatcatgatcccgccgccgaacgtcaccggcagcctgcacatgggccacgcg
ttccagcagaccatcatggacaccatgatccgctaccagcgcatgcagggtaaaaacacc
ctgtggcaggccggtaccgaccacgccggcatcgccacccagatggtggtggagcgcaag
atcgccgcggaagaaggcaaaacccgccacgactacggccgcgatgcgttcatcgaaaaa
atctggcagtggaaagcggaatccggcggcaccatcacccgccagatgcgccgcctgggc
aactccgtggactgggagcgcgagcgcttcaccatggacgaaggcctgtcgaacgcggtg
cgcgaagtgtttgtccgcctgcacaaagaagatctgatctaccgcggcaagcgcctggtg
aactgggatcctaaactgcgcaccgccatctccgatctggaagtggaaaaccgcgagtcc
aaaggctccatgtggcacctgcgctacccgctggccgacggcgccaaaaccgccgagggc
aaagactatctggtggtggccaccacccgtccggaaaccgtgctgggcgacaccggcgtg
gcggtcaacccggaagacccgcgttacaaggacctgatcggcaaagagatcgttctgccg
ctggtcggccgccgcatccgcatcgtcggcgacgagcacgccgacatggaaaaaggcacc
ggctgcgtgaagatcaccccggcgcacgatttcaacgactacgaagtcggcaaacgccac
ggcctgccgatgatcaacatcctgaccttcgacggcgacatccgccaggaagccgaggtg
ttcaacaccctgggcgaagtctgcgccgactactgcagcgagatcccggccgagttccgc
ggcctggagcgtttcgccgcgcgcaaggcggtggtggcggccttcgagcagctgggcctg
ctggcagagatcaaaccgcacgacctgacggtgccttacggcgaccgcggcggcgtggtg
atcgagccgatgctgaccgaccaatggtacgtgcgcaccgcgccgctggccaaagtggcg
gtggaagcggtcgagcaaggcgagatccagttcgtgccgaagcagtacgaaaacatgtac
ttcagctggatgcgcgacattcaggactggtgcatctcgcgccagctgtggtggggccac
cgcatcccggcctggtacgacgtgaacggcaaagtctacgtcggccgcagcgaagaagaa
gtgcgcagcgagaacaacctgggcgccgacgtggcgctgacccaggacgaagacgtgctg
gacacctggttctcctccggcctgtggaccttctccaccctgggctggccggagcagacc
gaagcgctgaaaaccttccacccgaccagcgtgatggtcagcggcttcgacatcatcttc
ttctggatcgcgcgcatgatcatgctgaccatgcacttcatcaaggatgaaaacggcaag
ccgcaggtgccgttcaagaccgtctacatgaccggcctgatccgcgacgacgaaggccag
aagatgtccaagtccaagggtaacgtcatcgatccgctggacatggtcgacggcatctcg
ctggaagacctgctggaaaaacgcaccggcaacatgatgcagccgcagctggcggagaaa
atccgcaagcgcaccgagaagcagttcccgaacggcatcgagccgcacggcaccgacgcc
ctgcgcttcaccctggcggcgctggcctcgaccggccgcgacatcaactgggacatgaag
cgcctggaaggctaccgcaacttctgcaacaagctgtggaacgccagccgcttcgtgctg
atgaacaccgaagagcatgactgcggcttcaacggcggcgataaagtgctgtcgctggcg
gaccgctggatcctggccgaattcaaccgcacggtgaaagcctaccgcgaagcgctggac
acctatcgcttcgatctggcggccaacattctgtacgaattcacctggaaccagttctgc
gactggtacctggagctgaccaagccggtggtgagcaacggcagcgaagcggaacagcgc
ggcacccgccacacgctgatcaccgtgctggaagcgctgctgcgcctggcgcacccgatc
attccgttcatcaccgagaccatctggcagcgcgtgaagccgctgaccggcagcgccgca
gacaccatcatgctgcagccgttcccggcctacgacgccgcgctggaagacgagcaggcg
ctgaacgatctggagtggatcaagcaggcgatcaccgcggtgcgcaacattcgcgccgag
atgaacatcgcgccgagcaagcagctggacgtgctgctgcgcaactgcagcgccgacgcc
cagcgccgcctgcaggaaaaccagagcttcatcgcccgcctggcgcgcctgtcctccatc
gcgccgctgccggccggtgagaaaggcccggtctccgtcaccaagctggtggacggcgcc
gagctgctgatcccgatggccggctttatcgacaaagacgccgagatcgcgcgtctggcg
aaagagatgggcaagctggatgcggaaatcgccgccatcgaaggcaagctggccaacgaa
ggcttcgtggcgcgcgcgccggaagcggtggtcgccaaagagcgcgaccgtctggcggcc
tgcaaggaaggcaaggtgaagctgcaggaacagcaggcgaccatcgccgcgctgtaa
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