Serratia ficaria: SAMEA4384070_0638
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Entry
SAMEA4384070_0638 CDS
T06444
Symbol
cynR_3
Name
(GenBank) Cyn operon transcriptional activator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_0638 (cynR_3)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SAMEA4384070_0638 (cynR_3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_11
HTH_20
Motif
Other DBs
NCBI-ProteinID:
SNV86931
UniProt:
A0A240AU89
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All DBs
Position
1:689724..690653
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AA seq
309 aa
AA seq
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MQVKKRALLGQLSDMDLRLLRVFKAVVDCGGMSAAELELNISLSTISKHIKDLEQRLGLT
LCQRGREGFAVTDEGLLVYQETVNLLAATEAFRRGVDEVHQRMGGQLHVAIFDHTVSNPQ
AQIGRAIALFSERAPEVSLQMYVEPINTIERGVIDGQFQIGIIPMHRSAESLAYRSLFSE
RMFLYCGAQHELFSANHDALNWALLHNYAFAGLGYHSPNMELSLQQHLHRKATGFAQESI
ATLILSGKYVGFLPDHYAAFFVAQNMMRAIKPELFRYHCEYSSVLRRSPIPQRVVKLFHE
CLLAAHGTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaaaagcgcgcgctgctcgggcaattgtcggatatggatctgcgtttgctg
cgggtattcaaagcggtggtcgactgcggcggcatgagcgccgccgagctggagctgaat
atcagcctgtcgaccatcagcaagcacatcaaggacctggagcaacggctggggctgacg
ctgtgccagcgcgggcgcgagggctttgcggtgaccgatgaggggttgcttgtctaccag
gaaaccgtcaacctgctggcggccaccgaggccttccgccgcggggtggatgaggtgcac
cagcgcatgggcggccagctgcacgtggcgatattcgaccatacggtcagcaacccgcag
gcgcaaataggccgggcgattgccttattcagcgagcgtgcgccggaagtttctttgcaa
atgtacgtcgaaccgattaataccatcgagcgcggagtcattgacggccaatttcaaatc
ggcattattcccatgcaccgcagcgcggaaagtttagcttatcgttctttattcagtgag
aggatgttcttatattgcggcgcgcagcatgaattattttccgccaatcacgatgcatta
aattgggcgctgttgcacaattacgcctttgccggattgggctaccattcgccgaatatg
gaattgagcctgcagcagcatttgcaccgcaaggcgacgggtttcgcccaggaatctatc
gccaccttaattctttccggcaagtacgtcggctttttgcctgaccactatgcggcgttt
tttgtcgcgcagaacatgatgcgggcaatcaagcctgagctgttccgctaccactgcgag
tattccagcgtgctgcgccgttcgccgatcccgcaacgggtggtgaaactgttccacgag
tgcctgctggcggcccatggaacagcctag
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