Serratia ficaria: SAMEA4384070_0787
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Entry
SAMEA4384070_0787 CDS
T06444
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sfj
Serratia ficaria
Pathway
sfj00470
D-Amino acid metabolism
sfj00550
Peptidoglycan biosynthesis
sfj01100
Metabolic pathways
sfj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMEA4384070_0787 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMEA4384070_0787 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMEA4384070_0787 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfj01011
]
SAMEA4384070_0787 (ddl)
Enzymes [BR:
sfj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SAMEA4384070_0787 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfj01011
]
Precursor biosynthesis
Amino acid ligase
SAMEA4384070_0787 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
TTL
RimK
ATPgrasp_ST
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
SNV88402
UniProt:
A0A240AY57
LinkDB
All DBs
Position
1:852224..853144
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AA seq
306 aa
AA seq
DB search
MADKVAVLLGGTSAERDVSLQSGAAVLAGLREAGIDAHGVDTRDVPVTQLKEQGFTKVFI
ALHGRGGEDGTLQGLLEFLALPYTGSGVMASALTMDKWRTKMVWQSMGLPVAPYVALNRQ
LYLGGEKAALLDRVASLGLPLIVKPSREGSSVGMSKVTESAALEAALEEAFRHDDDVLVE
KWLSGPEYTVAMLGDQVLPSIRIQPAGVFYDYQAKYISDDTQYFCPSGLSAEQEAEMAAL
ALRAYRGLDCSGWGRVDVMQDSDGSFYLLEVNTSPGMTSHSLVPMAARQFGLSFSQLVAR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagttgccgtactgctgggtggcacctccgctgaacgtgacgtatcgctg
caatccggcgccgccgtgctggccgggctgcgcgaagccggcatcgacgcccacggcgtc
gacacccgcgacgttccggtaacccagctgaaagagcaggggttcaccaaggtatttatc
gcgctgcacgggcgcggcggcgaagacggcaccctgcaggggctgctggagtttctcgcg
ctgccttataccggcagcggcgtgatggcttcggcgctgaccatggacaaatggcgcacc
aagatggtgtggcagtcgatgggcctgccggtggcgccttatgtggcgctgaatcgtcag
ctgtacctcggcggcgagaaagcggcgctgttggatcgcgtcgcgtcgctcggcctgccg
ctgatcgtcaagccgagccgcgagggttccagcgtcggcatgagcaaggtcaccgaaagc
gccgcgctggaagcggcgctggaagaagccttccgtcacgacgacgacgtgttggtggag
aaatggctgagcgggccggaatacaccgtggcgatgctgggcgaccaggtgctgccgtcg
atccgcattcagccggccggcgtgttctacgactatcaggccaagtacatttcggacgac
acgcagtacttctgcccgagcggtttaagcgccgagcaggaagccgagatggcggcgctg
gcgctgcgcgcctaccgcggcctggactgcagcggctggggccgcgtggacgtgatgcaa
gacagcgatggcagcttctatctgcttgaggtgaatacctctccgggcatgaccagtcat
agcctggtgccgatggcggcgcgccagtttggattaagcttctcgcagctggtagcgaga
attttggagttggccgactga
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